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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 3
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G271000.1
TraesCS4A01G466700.1
TraesCS4B01G043100.1
TraesCS4D01G040400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G13730.1 TraesCS4A01G271000.1 AT2G01570.1 21798944
AT3G13730.1 TraesCS4A01G466700.1 AT2G01570.1 21798944
AT3G13730.1 TraesCS4B01G043100.1 AT2G01570.1 21798944
AT3G13730.1 TraesCS4D01G040400.1 AT2G01570.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G106100.1 Wheat plastid 96.56 97.55
TraesCS3A01G103800.1 Wheat plastid 95.95 97.33
HORVU3Hr1G018860.5 Barley endoplasmic reticulum 93.72 93.35
Os01t0197100-01 Rice endoplasmic reticulum 79.76 80.41
EES02301 Sorghum endoplasmic reticulum, golgi, plastid 82.19 79.76
Zm00001d039453_P001 Maize plastid 80.97 79.37
GSMUA_Achr9P28740_001 Banana cytosol 37.25 76.99
GSMUA_Achr10P... Banana endoplasmic reticulum 62.75 68.89
GSMUA_Achr7P09630_001 Banana endoplasmic reticulum, golgi 65.99 68.63
GSMUA_Achr2P16740_001 Banana endoplasmic reticulum, golgi, plastid 61.54 67.11
KRH47133 Soybean extracellular, golgi 60.12 62.79
KRH44159 Soybean golgi 59.72 62.24
VIT_09s0002g02080.t01 Wine grape endoplasmic reticulum 59.51 61.89
Solyc03g121510.2.1 Tomato endoplasmic reticulum, golgi 55.47 58.92
CDX97511 Canola extracellular, golgi 56.07 56.42
AT3G13730.1 Thale cress extracellular, golgi 56.07 56.42
Bra021505.1-P Field mustard endoplasmic reticulum, golgi 56.07 56.3
CDY37485 Canola extracellular, golgi 56.07 56.3
CDY51737 Canola endoplasmic reticulum, golgi 56.07 56.3
Bra027405.1-P Field mustard endoplasmic reticulum, golgi 53.24 55.49
CDY23635 Canola endoplasmic reticulum, golgi 33.6 48.4
TraesCS5B01G133400.1 Wheat endoplasmic reticulum, golgi 35.43 35.14
TraesCS3B01G586500.1 Wheat endoplasmic reticulum, plasma membrane 33.2 32.87
TraesCS2B01G350400.2 Wheat endoplasmic reticulum, golgi 31.58 32.84
TraesCS2B01G004500.1 Wheat endoplasmic reticulum 31.17 32.49
TraesCS6B01G407000.1 Wheat golgi 31.98 31.98
TraesCS2B01G004600.1 Wheat endoplasmic reticulum, golgi 30.16 31.91
TraesCS4B01G234100.1 Wheat endoplasmic reticulum, golgi 32.59 31.82
TraesCS2B01G004400.1 Wheat endoplasmic reticulum 30.36 31.78
TraesCS2B01G004200.1 Wheat endoplasmic reticulum, golgi 30.77 31.73
TraesCS6B01G407100.1 Wheat endoplasmic reticulum, golgi 31.38 31.38
TraesCS5B01G551600.1 Wheat endoplasmic reticulum 30.77 31.21
TraesCS5B01G551300.1 Wheat endoplasmic reticulum 30.57 31.13
TraesCS2B01G418600.1 Wheat endoplasmic reticulum 30.36 31.12
TraesCS5B01G551400.1 Wheat endoplasmic reticulum 30.57 31.01
TraesCS6B01G269500.1 Wheat endoplasmic reticulum 29.35 30.66
TraesCS2B01G385100.1 Wheat cytosol 22.47 30.58
TraesCS7B01G354400.1 Wheat endoplasmic reticulum 29.96 30.52
TraesCS2B01G616600.1 Wheat endoplasmic reticulum, plasma membrane 29.76 29.94
TraesCS5B01G308300.1 Wheat endoplasmic reticulum, plasma membrane 29.55 29.8
TraesCS2B01G418700.1 Wheat endoplasmic reticulum 30.57 29.72
TraesCS2B01G418500.1 Wheat endoplasmic reticulum 29.35 28.6
TraesCS2B01G004700.1 Wheat endoplasmic reticulum, golgi 27.94 25.94
Protein Annotations
Gene3D:1.10.630.10MapMan:11.3.1.4ncoils:CoilInterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0000003GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506
GO:GO:0006629GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009791
GO:GO:0009908GO:GO:0016132GO:GO:0016705GO:GO:0016709GO:GO:0020037GO:GO:0048366
GO:GO:0048441GO:GO:0048443GO:GO:0055114InterPro:IPR036396PFAM:PF00067PRINTS:PR00463
ScanProsite:PS00086PANTHER:PTHR24286PANTHER:PTHR24286:SF98SUPFAM:SSF48264TMHMM:TMhelixEnsemblPlantsGene:TraesCS3B01G121200
EnsemblPlants:TraesCS3B01G121200.1SEG:seg::::
Description
No Description!
Coordinates
chr3B:-:91436223..91443338
Molecular Weight (calculated)
55628.0 Da
IEP (calculated)
10.171
GRAVY (calculated)
-0.096
Length
494 amino acids
Sequence
(BLAST)
001: MSVSWPAPST CAAAGALLAA AWLLCFRLFP AVARPRRRAM KTGAQLPPGS FGWPVVGETL DFVSCAYSPR PEAFVDKRRL RYGSAVFRSH LFGSATVVTA
101: DAEVNRFVLQ SDARSFVPWY PRSLTELMGK SSILVINGSL QRRVHGLVGA FFKSPQLKAQ VTADMQRRLA PALAAWREQG PGARLRIQDH AKTIVFQILV
201: RALIGLEAGP EMQQLKQQFQ EFIVGLMSLP IKLPGTRLYR SLQAKKRMAR VVQRIIQEKR RRRALDGGGA PRDAIDVLMG DGSEELTDEL ISDNMIDFMI
301: PAEDSVPVLI TLAVKFLSEC PLALQQLEEE NMQLKMRKTD LGETLQWTDY MSLSFTQHVI TETLRIGNII SGIMRKAVRD VEVKGHLIPK GWRVFMYFRS
401: VHLDDMLYED PCKFNPWRWK CVNQQEKDMS TSSFTPFGGG QRLCPGLDLA RLEASIFLHH LVTSFRWVAE EDHIVNFPTV RLKGGMPIRV TAKD
Best Arabidopsis Sequence Match ( AT3G13730.1 )
(BLAST)
001: MDTSSSLLFF SFFFFIIIVI FNKINGLRSS PASKKKLNDH HVTSQSHGPK FPHGSLGWPV IGETIEFVSS AYSDRPESFM DKRRLMYGRV FKSHIFGTAT
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I
Arabidopsis Description
CYP90D1CYP90D1 [Source:UniProtKB/TrEMBL;Acc:A0A178VDZ8]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.