Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 1
- extracellular 3
- endoplasmic reticulum 5
- vacuole 3
- plasma membrane 3
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_Achr1P21300_001 | |
| GSMUA_Achr8P18250_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G13730.1 | GSMUA_Achr10P... | AT2G01570.1 | 21798944 |
| AT3G13730.1 | GSMUA_Achr1P21300_001 | AT2G01570.1 | 21798944 |
| AT3G13730.1 | GSMUA_Achr8P18250_001 | AT2G01570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P28740_001 | Banana | cytosol | 44.0 | 87.45 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 77.68 | 82.0 |
| GSMUA_Achr2P16740_001 | Banana | endoplasmic reticulum, golgi, plastid | 69.89 | 73.29 |
| Os05t0200400-01 | Rice | endoplasmic reticulum, mitochondrion, plastid | 40.0 | 67.38 |
| TraesCS3D01G106100.1 | Wheat | plastid | 68.42 | 66.46 |
| TraesCS3B01G121200.1 | Wheat | plastid | 68.63 | 65.99 |
| TraesCS3A01G103800.1 | Wheat | plastid | 67.58 | 65.91 |
| Os01t0197100-01 | Rice | endoplasmic reticulum | 67.79 | 65.71 |
| VIT_09s0002g02080.t01 | Wine grape | endoplasmic reticulum | 65.47 | 65.47 |
| HORVU3Hr1G018860.5 | Barley | endoplasmic reticulum | 68.21 | 65.32 |
| KRH44159 | Soybean | golgi | 65.05 | 65.19 |
| KRH47133 | Soybean | extracellular, golgi | 64.84 | 65.12 |
| EES02301 | Sorghum | endoplasmic reticulum, golgi, plastid | 69.26 | 64.64 |
| Zm00001d039453_P001 | Maize | plastid | 68.42 | 64.48 |
| EES17857 | Sorghum | plastid | 66.32 | 60.0 |
| Solyc03g121510.2.1 | Tomato | endoplasmic reticulum, golgi | 58.11 | 59.35 |
| Zm00001d037745_P001 | Maize | plasma membrane, plastid | 64.63 | 58.81 |
| CDX97511 | Canola | extracellular, golgi | 58.74 | 56.82 |
| AT3G13730.1 | Thale cress | extracellular, golgi | 57.89 | 56.01 |
| CDY37485 | Canola | extracellular, golgi | 57.89 | 55.89 |
| Bra021505.1-P | Field mustard | endoplasmic reticulum, golgi | 57.68 | 55.69 |
| CDY51737 | Canola | endoplasmic reticulum, golgi | 57.68 | 55.69 |
| Bra027405.1-P | Field mustard | endoplasmic reticulum, golgi | 55.37 | 55.49 |
| CDY23635 | Canola | endoplasmic reticulum, golgi | 35.79 | 49.56 |
| GSMUA_Achr5P10500_001 | Banana | endoplasmic reticulum, vacuole | 29.26 | 33.82 |
| GSMUA_Achr5P04260_001 | Banana | endoplasmic reticulum, plasma membrane | 33.26 | 33.33 |
| GSMUA_Achr8P28130_001 | Banana | cytosol | 29.05 | 32.17 |
| GSMUA_Achr4P10750_001 | Banana | endoplasmic reticulum, plasma membrane | 32.84 | 32.1 |
| GSMUA_Achr2P13610_001 | Banana | endoplasmic reticulum, golgi | 31.16 | 31.83 |
| GSMUA_Achr6P00040_001 | Banana | endoplasmic reticulum | 30.95 | 31.61 |
| GSMUA_Achr8P00150_001 | Banana | endoplasmic reticulum, golgi | 31.79 | 31.39 |
| GSMUA_Achr4P09180_001 | Banana | endoplasmic reticulum, golgi | 31.79 | 30.82 |
| GSMUA_Achr3P08890_001 | Banana | endoplasmic reticulum, vacuole | 31.79 | 30.82 |
| GSMUA_Achr4P32900_001 | Banana | endoplasmic reticulum | 30.74 | 30.8 |
| GSMUA_Achr8P26350_001 | Banana | endoplasmic reticulum, extracellular | 32.0 | 30.1 |
| GSMUA_Achr5P10490_001 | Banana | plasma membrane, vacuole | 30.32 | 29.69 |
| GSMUA_Achr8P26330_001 | Banana | endoplasmic reticulum, extracellular | 31.79 | 29.67 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 32.0 | 29.17 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 29.47 | 28.99 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:11.3.1.4 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0020037 | GO:GO:0046872 | GO:GO:0055114 |
| EnsemblPlantsGene:GSMUA_Achr7G09630_001 | EnsemblPlants:GSMUA_Achr7P09630_001 | EnsemblPlants:GSMUA_Achr7T09630_001 | InterPro:IPR036396 | UniProt:M0TG51 | PFAM:PF00067 |
| PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24286 | PANTHER:PTHR24286:SF30 | SUPFAM:SSF48264 | SignalP:SignalP-TM |
| TMHMM:TMhelix | UniParc:UPI00029570BE | : | : | : | : |
Description
Cytochrome P450 90D2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G09630_001]
Coordinates
chr7:-:7839562..7841974
Molecular Weight (calculated)
54374.3 Da
IEP (calculated)
9.978
GRAVY (calculated)
-0.221
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKLLMLWVA SLAFLVTATI ARTWRTKKTN NQRAQLPAGS RGWPLVGETL HFVSSAYSPR PERFMDKRRL MYGKVFRSHL FGSPTIVSTD AEVSRRILQS
101: DASSFVPWYP KSLTELMGKS SILLINGNLQ RRVHGLIGAF FKSPDLKAQI TGDMQRYVRE SMAKWKDHQL IHIQDETKNV VFQILVKALI GLEKEKEMTF
201: LKQQFKEFIA GLMSLPVKLP GSRLYRSLQA SLPLRMGMLI ESIIEEKRKN NSGCSPRDVV DVLINDASDQ LTDDLISDNM IDLMIPAEDS VPVLVTLAVK
301: YLSECPLALQ HLQEENTQLK KRRSLVGEDL RWTDYMSLSF TQDVITETLR MGNIISGIMR KAVKDVEIRG HLIPKGWCVL TYFRSVHLDE NHYGEAYRFD
401: PWRWKDRDMS SSCSFTPFGG GQRLCPGLDL ARLEAAIFLH HLVTNFTWAA EEDQIVNFPT VRLKRGLPIR VRRKS
101: DASSFVPWYP KSLTELMGKS SILLINGNLQ RRVHGLIGAF FKSPDLKAQI TGDMQRYVRE SMAKWKDHQL IHIQDETKNV VFQILVKALI GLEKEKEMTF
201: LKQQFKEFIA GLMSLPVKLP GSRLYRSLQA SLPLRMGMLI ESIIEEKRKN NSGCSPRDVV DVLINDASDQ LTDDLISDNM IDLMIPAEDS VPVLVTLAVK
301: YLSECPLALQ HLQEENTQLK KRRSLVGEDL RWTDYMSLSF TQDVITETLR MGNIISGIMR KAVKDVEIRG HLIPKGWCVL TYFRSVHLDE NHYGEAYRFD
401: PWRWKDRDMS SSCSFTPFGG GQRLCPGLDL ARLEAAIFLH HLVTNFTWAA EEDQIVNFPT VRLKRGLPIR VRRKS
001: MDTSSSLLFF SFFFFIIIVI FNKINGLRSS PASKKKLNDH HVTSQSHGPK FPHGSLGWPV IGETIEFVSS AYSDRPESFM DKRRLMYGRV FKSHIFGTAT
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I
Arabidopsis Description
CYP90D1CYP90D1 [Source:UniProtKB/TrEMBL;Acc:A0A178VDZ8]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.