Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 1
- extracellular 3
- endoplasmic reticulum 6
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_01s0011g05260.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G13730.1 | VIT_01s0011g05260.t01 | AT2G01570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47133 | Soybean | extracellular, golgi | 75.16 | 75.48 |
| KRH44159 | Soybean | golgi | 75.16 | 75.32 |
| GSMUA_Achr9P28740_001 | Banana | cytosol | 36.63 | 72.8 |
| Solyc03g121510.2.1 | Tomato | endoplasmic reticulum, golgi | 66.74 | 68.17 |
| GSMUA_Achr2P16740_001 | Banana | endoplasmic reticulum, golgi, plastid | 64.42 | 67.55 |
| GSMUA_Achr7P09630_001 | Banana | endoplasmic reticulum, golgi | 65.47 | 65.47 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 61.47 | 64.89 |
| Os05t0200400-01 | Rice | endoplasmic reticulum, mitochondrion, plastid | 37.05 | 62.41 |
| CDX97511 | Canola | extracellular, golgi | 63.79 | 61.71 |
| Bra021505.1-P | Field mustard | endoplasmic reticulum, golgi | 63.79 | 61.59 |
| CDY51737 | Canola | endoplasmic reticulum, golgi | 63.79 | 61.59 |
| CDY37485 | Canola | extracellular, golgi | 63.37 | 61.18 |
| AT3G13730.1 | Thale cress | extracellular, golgi | 62.95 | 60.9 |
| Os01t0197100-01 | Rice | endoplasmic reticulum | 62.53 | 60.61 |
| Bra027405.1-P | Field mustard | endoplasmic reticulum, golgi | 60.42 | 60.55 |
| TraesCS3D01G106100.1 | Wheat | plastid | 61.68 | 59.92 |
| HORVU3Hr1G018860.5 | Barley | endoplasmic reticulum | 62.32 | 59.68 |
| EES02301 | Sorghum | endoplasmic reticulum, golgi, plastid | 63.79 | 59.53 |
| TraesCS3B01G121200.1 | Wheat | plastid | 61.89 | 59.51 |
| TraesCS3A01G103800.1 | Wheat | plastid | 60.84 | 59.34 |
| Zm00001d039453_P001 | Maize | plastid | 62.74 | 59.13 |
| EES17857 | Sorghum | plastid | 61.05 | 55.24 |
| Zm00001d037745_P001 | Maize | plasma membrane, plastid | 60.63 | 55.17 |
| CDY23635 | Canola | endoplasmic reticulum, golgi | 38.95 | 53.94 |
| VIT_04s0023g02650.t01 | Wine grape | endoplasmic reticulum, golgi | 50.32 | 49.18 |
| VIT_13s0067g00660.t01 | Wine grape | cytosol | 29.68 | 38.74 |
| VIT_12s0057g01460.t01 | Wine grape | endoplasmic reticulum, golgi | 34.74 | 34.96 |
| VIT_04s0023g01630.t01 | Wine grape | endoplasmic reticulum | 29.89 | 34.8 |
| VIT_14s0066g00170.t01 | Wine grape | cytosol | 28.84 | 34.42 |
| VIT_01s0011g00170.t01 | Wine grape | endoplasmic reticulum | 21.26 | 34.35 |
| VIT_01s0011g00190.t01 | Wine grape | endoplasmic reticulum, golgi | 33.47 | 34.34 |
| VIT_14s0083g01110.t01 | Wine grape | endoplasmic reticulum, golgi | 32.42 | 33.19 |
| VIT_15s0048g01960.t01 | Wine grape | cytosol | 20.21 | 32.21 |
| VIT_02s0025g04080.t01 | Wine grape | endoplasmic reticulum, vacuole | 30.32 | 30.51 |
| VIT_16s0039g00290.t01 | Wine grape | endoplasmic reticulum, golgi | 30.95 | 30.25 |
| VIT_16s0100g00600.t01 | Wine grape | endoplasmic reticulum | 30.53 | 29.41 |
| VIT_16s0100g00610.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 29.47 | 29.23 |
| VIT_04s0210g00160.t01 | Wine grape | endoplasmic reticulum, golgi | 30.32 | 29.03 |
| VIT_04s0210g00150.t01 | Wine grape | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 30.74 | 28.97 |
| VIT_18s0122g01470.t01 | Wine grape | endoplasmic reticulum, extracellular | 26.95 | 26.89 |
| VIT_18s0122g01460.t01 | Wine grape | endoplasmic reticulum, extracellular, mitochondrion | 26.74 | 26.68 |
| VIT_18s0001g00030.t01 | Wine grape | extracellular, golgi, plasma membrane | 26.53 | 26.47 |
| VIT_18s0122g01480.t01 | Wine grape | cytosol | 24.21 | 26.2 |
Protein Annotations
| Gene3D:1.10.630.10 | EntrezGene:100259945 | wikigene:100259945 | MapMan:11.3.1.4 | ProteinID:CBI35940 | ProteinID:CBI35940.3 |
| InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | UniProt:D7TZZ4 | EMBL:FN596494 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 |
| GO:GO:0006629 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0010268 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016125 | GO:GO:0016132 | GO:GO:0016491 | GO:GO:0016705 |
| GO:GO:0016709 | GO:GO:0020037 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036396 | EntrezGene:LOC100259945 |
| wikigene:LOC100259945 | PFAM:PF00067 | PRINTS:PR00385 | PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24286 |
| PANTHER:PTHR24286:SF30 | SUPFAM:SSF48264 | TMHMM:TMhelix | UniParc:UPI0001BE4B6D | ArrayExpress:VIT_09s0002g02080 | EnsemblPlantsGene:VIT_09s0002g02080 |
| EnsemblPlants:VIT_09s0002g02080.t01 | RefSeq:XP_002275659 | RefSeq:XP_002275659.2 | RefSeq:XP_010654520.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr9:-:1887505..1891994
Molecular Weight (calculated)
54712.8 Da
IEP (calculated)
9.945
GRAVY (calculated)
-0.167
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MHNLWIVFLT AIFLSTIILL YRNRSRIRSS PSSSLPLGTL GWPLIGETLE FISCAYSDRP ESFMERRRRM YGKVFKSHIF GSPTIVSIDA EVSRFVLQSD
101: SKAFVPSYPK SLTELMGQSS ILLINGSLQR RVHGLIGAFF KSPHLKAQIT QEMESYIQKS MGSWRDDHPI FIQDEAKNIA FQVLVKALIS LNPGEEMEFL
201: RKQFQEFISG LMSLPVNIPG TRLYRSLQAK KKMVQLVGKI IQERRNINQP SKVPKDVLDV LLNDSSQLLT DTLISDNMID LMIPGEDSVP VLVTLAIKYL
301: SDCPAALQQL TEENMRLKRL KAERGETMTW SDYLSLPFTQ TVITETLRLG NVIIGVMRKA MKDVEIKGHR IPKGWCVFAY FRSVHLDESQ YDWPYQFNPW
401: RWQDKNISSC SFTPFGGGQR LCPGLDLARL EASIFLHHFV TQFRWVAEDD SIVNFPTVRM KRRMPVWVKR RRDYS
101: SKAFVPSYPK SLTELMGQSS ILLINGSLQR RVHGLIGAFF KSPHLKAQIT QEMESYIQKS MGSWRDDHPI FIQDEAKNIA FQVLVKALIS LNPGEEMEFL
201: RKQFQEFISG LMSLPVNIPG TRLYRSLQAK KKMVQLVGKI IQERRNINQP SKVPKDVLDV LLNDSSQLLT DTLISDNMID LMIPGEDSVP VLVTLAIKYL
301: SDCPAALQQL TEENMRLKRL KAERGETMTW SDYLSLPFTQ TVITETLRLG NVIIGVMRKA MKDVEIKGHR IPKGWCVFAY FRSVHLDESQ YDWPYQFNPW
401: RWQDKNISSC SFTPFGGGQR LCPGLDLARL EASIFLHHFV TQFRWVAEDD SIVNFPTVRM KRRMPVWVKR RRDYS
001: MDTSSSLLFF SFFFFIIIVI FNKINGLRSS PASKKKLNDH HVTSQSHGPK FPHGSLGWPV IGETIEFVSS AYSDRPESFM DKRRLMYGRV FKSHIFGTAT
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I
Arabidopsis Description
CYP90D1CYP90D1 [Source:UniProtKB/TrEMBL;Acc:A0A178VDZ8]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.