Factsheet for VIT_16s0100g00600.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
plastid 1
extracellular 5
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0100g00610.t01	Wine grape	endoplasmic reticulum, plasma membrane	70.79	72.86
VIT_15s0048g01960.t01	Wine grape	cytosol	36.31	60.07
VIT_02s0025g04080.t01	Wine grape	endoplasmic reticulum, vacuole	56.8	59.32
VIT_18s0122g01470.t01	Wine grape	endoplasmic reticulum, extracellular	44.83	46.43
VIT_18s0122g01480.t01	Wine grape	cytosol	40.97	46.01
VIT_18s0122g01460.t01	Wine grape	endoplasmic reticulum, extracellular, mitochondrion	44.02	45.59
VIT_18s0001g00030.t01	Wine grape	extracellular, golgi, plasma membrane	43.61	45.17
VIT_04s0210g00160.t01	Wine grape	endoplasmic reticulum, golgi	42.8	42.54
VIT_04s0210g00150.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	41.78	40.87
VIT_14s0066g00170.t01	Wine grape	cytosol	28.8	35.68
VIT_01s0011g00170.t01	Wine grape	endoplasmic reticulum	21.1	35.37
VIT_04s0023g01630.t01	Wine grape	endoplasmic reticulum	28.4	34.31
VIT_12s0057g01460.t01	Wine grape	endoplasmic reticulum, golgi	31.85	33.26
VIT_14s0083g01110.t01	Wine grape	endoplasmic reticulum, golgi	31.24	33.19
VIT_01s0011g00190.t01	Wine grape	endoplasmic reticulum, golgi	30.83	32.83
VIT_13s0067g00660.t01	Wine grape	cytosol	23.94	32.42
VIT_09s0002g02080.t01	Wine grape	endoplasmic reticulum	29.41	30.53
VIT_16s0039g00290.t01	Wine grape	endoplasmic reticulum, golgi	27.38	27.78
VIT_04s0023g02650.t01	Wine grape	endoplasmic reticulum, golgi	27.38	27.78

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100253786	wikigene:100253786	MapMan:50.1.13	ProteinID:CBI31826	ProteinID:CBI31826.3
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:D7TMV3	EMBL:FN596000
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0010268
GO:GO:0016020	GO:GO:0016021	GO:GO:0016125	GO:GO:0016132	GO:GO:0016491	GO:GO:0016705
GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100253786	wikigene:LOC100253786
PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF11
SUPFAM:SSF48264	TIGR:TC69556	TMHMM:TMhelix	UniParc:UPI0001BE4025	ArrayExpress:VIT_16s0100g00600	EnsemblPlantsGene:VIT_16s0100g00600
EnsemblPlants:VIT_16s0100g00600.t01	RefSeq:XP_002274332	RefSeq:XP_002274332.2	:	:	:

Description

No Description!

Coordinates

chr16:+:16088472..16095546

Molecular Weight (calculated)

56751.4 Da

IEP (calculated)

9.455

GRAVY (calculated)

-0.046

Length

493 amino acids

Sequence
(BLAST)

001: MGYLWYAFAF TATLLVCITH WVYSFRKPKF NGKLPPGSMG LPILGETLQF FAPNTALDVA PFIRERMNRY GPLFRTSLVG WPLVISTDPD LSRFILQQEG
101: KLVHSWYTES FDNVVGKQNV LSAKGAMHKC LRNLILNQFG SESLKTRFLT QVEELVLKHL QLWSNCTSVE LKEAIASMIF GFTAKKLFDY DESRTPEKLR
201: ENYAAFLDGL ISFPLKIPGT SYWKCLQGRK RAMKTIRNML DERRASPERE DKDYIDFVLE EMQKDQTILT EEIVLDLLFA LPFATYETTS SALVLAIQYL
301: GSHPSALAEI TKEHESILRS RERVDSGITW NEYKSMNFTM MVINETVRLG NIVPGIFRKV AKDIEIKGYT IPAGWMVMIS PPAVHFNPTL YKDPLVFNPW
401: RWQCQEPNAG SRNFMGFGGG IRQCVGAEFV KLQMAIFLHH LLTKYRWTVI KGGDTVWKPG LVFPKGFHVQ ISERTKFIYL LLNYIKYFFI IIL

Best Arabidopsis Sequence Match ( AT1G12740.1 )
(BLAST)

001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD

Arabidopsis Description

CYP87A2Cytochrome P450, family 87, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:Q9LN73]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.