Factsheet for VIT_04s0210g00160.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

cytosol 2
plastid 1
golgi 4
endoplasmic reticulum 5
extracellular 3
vacuole 3
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0210g00150.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	69.35	68.25
VIT_18s0001g00030.t01	Wine grape	extracellular, golgi, plasma membrane	50.81	52.94
VIT_18s0122g01470.t01	Wine grape	endoplasmic reticulum, extracellular	49.8	51.89
VIT_18s0122g01460.t01	Wine grape	endoplasmic reticulum, extracellular, mitochondrion	49.6	51.68
VIT_18s0122g01480.t01	Wine grape	cytosol	44.76	50.57
Solyc04g009930.1.1	Tomato	cytosol, endoplasmic reticulum, golgi	45.36	46.2
VIT_02s0025g04080.t01	Wine grape	endoplasmic reticulum, vacuole	43.75	45.97
VIT_15s0048g01960.t01	Wine grape	cytosol	26.01	43.29
VIT_16s0100g00600.t01	Wine grape	endoplasmic reticulum	42.54	42.8
VIT_16s0100g00610.t01	Wine grape	endoplasmic reticulum, plasma membrane	39.92	41.34
VIT_14s0066g00170.t01	Wine grape	cytosol	27.42	34.17
VIT_04s0023g01630.t01	Wine grape	endoplasmic reticulum	26.41	32.11
VIT_13s0067g00660.t01	Wine grape	cytosol	23.39	31.87
VIT_14s0083g01110.t01	Wine grape	endoplasmic reticulum, golgi	29.23	31.25
VIT_12s0057g01460.t01	Wine grape	endoplasmic reticulum, golgi	29.64	31.14
VIT_04s0023g02650.t01	Wine grape	endoplasmic reticulum, golgi	30.04	30.66
VIT_01s0011g00170.t01	Wine grape	endoplasmic reticulum	18.15	30.61
VIT_09s0002g02080.t01	Wine grape	endoplasmic reticulum	29.03	30.32
VIT_01s0011g00190.t01	Wine grape	endoplasmic reticulum, golgi	27.82	29.81
VIT_16s0039g00290.t01	Wine grape	endoplasmic reticulum, golgi	26.01	26.54

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100267946	wikigene:100267946	MapMan:50.1.13	ProteinID:CBI38410	ProteinID:CBI38410.3
ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	UniProt:D7U6P0
EMBL:FN596531	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0010268	GO:GO:0016020	GO:GO:0016021	GO:GO:0016125	GO:GO:0016132	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100267946
wikigene:LOC100267946	PFAM:PF00067	PRINTS:PR00465	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF90
SUPFAM:SSF48264	TIGR:TC55252	TMHMM:TMhelix	UniParc:UPI0001BE5189	ArrayExpress:VIT_04s0210g00160	EnsemblPlantsGene:VIT_04s0210g00160
EnsemblPlants:VIT_04s0210g00160.t01	RefSeq:XP_003631906	RefSeq:XP_003631906.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:-:20530084..20532381

Molecular Weight (calculated)

56627.9 Da

IEP (calculated)

8.644

GRAVY (calculated)

0.001

Length

496 amino acids

Sequence
(BLAST)

001: MWPIGLCIVT LVIIWVTNWI HRWRNPRCNG TLPPGTLGFP FIGETIQFFI PGHSLDLLPF FKKREIGFIF FHFISSIEYG RLFRTSLVGR PVAVAADPEV
101: NHFILQEEGK SVEMFYLDSI VKLFGKDGAS THATGHVHKY LRTLVMNYFG FESLRDKLLP KVEAVARKSL DTWSSQPSVE LNYAISQVMF EFISMELFSY
201: DPSASTESMS DAFINFLKGL VSIPLNIPGT TFHKCLKNQK KVMKMLREIV EERCASPERR HGDVLDYFLE EMKSKTFITK DFIVYIMFGL LFATFESIPT
301: MFTLVFKLIM EHPLVWQELK DEHEAILRNS QTSNSTITWE DYKSMTFTFD VINEALRMGN ISLGSFRRAV EDVRINGYTI PAGWIILVVP SALHMDPETY
401: PDPLVFNPWR WKEDGGSKIR VKNFTPFGRG IRSCPGAELS KLVAATFIHA AVTKYRFTKI KGGRVVRNPM LKFKDGFYVK VSEMVTEGGG SAAEDA

Best Arabidopsis Sequence Match ( AT1G12740.1 )
(BLAST)

001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD

Arabidopsis Description

CYP87A2Cytochrome P450, family 87, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:Q9LN73]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.