Factsheet for Solyc04g009930.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, cytosol

Predictor Summary:

plastid 1
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0122g01470.t01	Wine grape	endoplasmic reticulum, extracellular	49.28	50.42
VIT_18s0001g00030.t01	Wine grape	extracellular, golgi, plasma membrane	49.08	50.21
VIT_18s0122g01460.t01	Wine grape	endoplasmic reticulum, extracellular, mitochondrion	49.08	50.21
VIT_18s0122g01480.t01	Wine grape	cytosol	44.76	49.66
VIT_04s0210g00160.t01	Wine grape	endoplasmic reticulum, golgi	46.2	45.36
VIT_04s0210g00150.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	45.59	44.05
Solyc08g007900.1.1	Tomato	nucleus	42.51	43.95
Solyc08g080430.1.1	Tomato	endoplasmic reticulum, vacuole	42.09	43.07
Solyc06g051750.2.1	Tomato	endoplasmic reticulum, golgi	31.83	31.83
Solyc02g089160.2.1	Tomato	endoplasmic reticulum	30.18	31.68
Solyc02g085360.2.1	Tomato	endoplasmic reticulum	30.18	29.94
Solyc02g093540.2.1	Tomato	extracellular, golgi	27.52	28.09
Solyc03g121510.2.1	Tomato	endoplasmic reticulum, golgi	26.08	27.31
Solyc02g065750.1.1	Tomato	endoplasmic reticulum	26.08	27.19
Solyc07g056160.2.1	Tomato	endoplasmic reticulum, plasma membrane	26.08	26.46
Solyc02g084740.2.1	Tomato	cytosol	26.69	26.32
Solyc03g019870.2.1	Tomato	extracellular	25.05	25.42

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0010268
GO:GO:0016020	GO:GO:0016021	GO:GO:0016125	GO:GO:0016132	GO:GO:0016491	GO:GO:0016705
GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	UniProt:K4BPE8	PFAM:PF00067
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF90	SUPFAM:SSF48264	EnsemblPlantsGene:Solyc04g009930.1
EnsemblPlants:Solyc04g009930.1.1	TMHMM:TMhelix	UniParc:UPI0002765C15	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:+:3248530..3253636

Molecular Weight (calculated)

56114.6 Da

IEP (calculated)

9.867

GRAVY (calculated)

-0.150

Length

487 amino acids

Sequence
(BLAST)

001: MDTLFTSFQD EIRRTNFLGV WYFVLTILTI YVTKWIYRWR NPKCNGILPP GSMGLPFIGE TLQLILPSHS LDLPPFLKNR IKKYGQMFKT NIAGRPVIIS
101: ADPEFNSFIL KQDGKLVETW SLDTFAEVFE QNTHSSRKYT RHLTLNHFGV EALKDKLLPQ MENFVNLVLQ KWSTHESLEV KSAATKMTVD FAAKQIFSGD
201: LENAPFNISD MFRDLVEGLM SFPINLPGTS HHKCLKIHKK VRETMRDVLK KRIESSTKKR KGEEDLVDHL LKDMDSQKFL TQDYIVQMMF GLLFVTSDSI
301: STTLALSFKL LVEHPHVLEE LIVEHDLILK NKENLDAPLT WNDYKSMTFT LQVINEVLRL GNIAPGLFRR ALKDIPINGY TIPAGWVIMI ATAALHLNSD
401: QFEDPLSFNP WRWKKIRLSG GAKNFMPFGY GMKQCAGAEY SRVFLATFLH VLVTKYRWTM VKGGKIIRAP IIRFPDGFHF NISQKNQ

Best Arabidopsis Sequence Match ( AT1G12740.1 )
(BLAST)

001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD

Arabidopsis Description

CYP87A2Cytochrome P450, family 87, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:Q9LN73]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.