Factsheet for VIT_18s0001g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

cytosol 1
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0122g01470.t01	Wine grape	endoplasmic reticulum, extracellular	85.92	85.92
VIT_18s0122g01480.t01	Wine grape	cytosol	78.57	85.19
VIT_18s0122g01460.t01	Wine grape	endoplasmic reticulum, extracellular, mitochondrion	78.99	78.99
VIT_04s0210g00150.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	54.2	51.19
VIT_04s0210g00160.t01	Wine grape	endoplasmic reticulum, golgi	52.94	50.81
VIT_02s0025g04080.t01	Wine grape	endoplasmic reticulum, vacuole	50.21	50.64
VIT_15s0048g01960.t01	Wine grape	cytosol	31.09	49.66
Solyc04g009930.1.1	Tomato	cytosol, endoplasmic reticulum, golgi	50.21	49.08
VIT_16s0100g00600.t01	Wine grape	endoplasmic reticulum	45.17	43.61
VIT_16s0100g00610.t01	Wine grape	endoplasmic reticulum, plasma membrane	42.65	42.38
VIT_01s0011g00170.t01	Wine grape	endoplasmic reticulum	21.22	34.35
VIT_01s0011g00190.t01	Wine grape	endoplasmic reticulum, golgi	31.93	32.83
VIT_14s0066g00170.t01	Wine grape	cytosol	26.68	31.91
VIT_14s0083g01110.t01	Wine grape	endoplasmic reticulum, golgi	31.09	31.9
VIT_12s0057g01460.t01	Wine grape	endoplasmic reticulum, golgi	29.41	29.66
VIT_04s0023g01630.t01	Wine grape	endoplasmic reticulum	25.21	29.41
VIT_13s0067g00660.t01	Wine grape	cytosol	22.48	29.4
VIT_04s0023g02650.t01	Wine grape	endoplasmic reticulum, golgi	27.94	27.37
VIT_09s0002g02080.t01	Wine grape	endoplasmic reticulum	26.47	26.53
VIT_16s0039g00290.t01	Wine grape	endoplasmic reticulum, golgi	25.84	25.31

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100252239	wikigene:100252239	MapMan:50.1.13	ProteinID:CCB45381	ProteinID:CCB45381.1
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:F6H0A9	EMBL:FN595227
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0010268
GO:GO:0016020	GO:GO:0016021	GO:GO:0016125	GO:GO:0016132	GO:GO:0016491	GO:GO:0016705
GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100252239	wikigene:LOC100252239
PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF90
SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI00019854D3	ArrayExpress:VIT_18s0001g00030	EnsemblPlantsGene:VIT_18s0001g00030	EnsemblPlants:VIT_18s0001g00030.t01
RefSeq:XP_002284844	RefSeq:XP_002284844.1	:	:	:	:

Description

No Description!

Coordinates

chr18:-:1084854..1087799

Molecular Weight (calculated)

53790.7 Da

IEP (calculated)

9.796

GRAVY (calculated)

0.037

Length

476 amino acids

Sequence
(BLAST)

001: MYWSVWLCVV SLFIASIIHW VYKWRNPKCN GKLPPGSMGF PLIGETIQFF IPSKSLDVSS FIRKRMKKYG PLFCTNLVGR PVVVSSDPDF NYYIFQQEGR
101: LVEIWYLDSF ARLVGQDASQ STAASGYVHK YLRNLVLAHF GTEVLKDKLL SKAEDMIRTR LHDWSKLPAL EFKTCVSSMI FDFTANELFS YDIKKMGENF
201: SERFTNIIQA VASFPLNIPG TTFHKCLKNQ KEVIKLIRDI LKERKVSPES RKGDFLDQIV DDIKKEKFLS DDFIVLVMFG ILLASFETIS ATLTLAVKLL
301: IENPSVMQEL IEEHEAILKN RENSNSGISW KEYKSMTFTH QVINEALRLA SVAPGILRRA IKDIQVNGYT IPAGWTIMVV PAALQLSPDA FVDPLAFNPS
401: RWKDMGVGVV AKNFIPFGGG SRLCAGAEFT KVLMTTFFHV LVTNYRLTKI KGGQIARSPA LTFGNGLHIN ISKKHG

Best Arabidopsis Sequence Match ( AT1G12740.1 )
(BLAST)

001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD

Arabidopsis Description

CYP87A2Cytochrome P450, family 87, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:Q9LN73]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.