Factsheet for VIT_04s0210g00150.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
endoplasmic reticulum 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0210g00160.t01	Wine grape	endoplasmic reticulum, golgi	68.25	69.35
VIT_18s0001g00030.t01	Wine grape	extracellular, golgi, plasma membrane	51.19	54.2
VIT_18s0122g01470.t01	Wine grape	endoplasmic reticulum, extracellular	49.8	52.73
VIT_18s0122g01480.t01	Wine grape	cytosol	45.04	51.71
VIT_18s0122g01460.t01	Wine grape	endoplasmic reticulum, extracellular, mitochondrion	47.82	50.63
Solyc04g009930.1.1	Tomato	cytosol, endoplasmic reticulum, golgi	44.05	45.59
VIT_02s0025g04080.t01	Wine grape	endoplasmic reticulum, vacuole	41.47	44.28
VIT_15s0048g01960.t01	Wine grape	cytosol	25.6	43.29
VIT_16s0100g00600.t01	Wine grape	endoplasmic reticulum	40.87	41.78
VIT_16s0100g00610.t01	Wine grape	endoplasmic reticulum, plasma membrane	38.49	40.5
VIT_14s0066g00170.t01	Wine grape	cytosol	27.38	34.67
VIT_01s0011g00170.t01	Wine grape	endoplasmic reticulum	18.45	31.63
VIT_14s0083g01110.t01	Wine grape	endoplasmic reticulum, golgi	28.97	31.47
VIT_13s0067g00660.t01	Wine grape	cytosol	22.42	31.04
VIT_01s0011g00190.t01	Wine grape	endoplasmic reticulum, golgi	28.37	30.89
VIT_04s0023g01630.t01	Wine grape	endoplasmic reticulum	25.0	30.88
VIT_09s0002g02080.t01	Wine grape	endoplasmic reticulum	28.97	30.74
VIT_12s0057g01460.t01	Wine grape	endoplasmic reticulum, golgi	28.77	30.72
VIT_04s0023g02650.t01	Wine grape	endoplasmic reticulum, golgi	28.77	29.84
VIT_16s0039g00290.t01	Wine grape	endoplasmic reticulum, golgi	27.58	28.6

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100264506	wikigene:100264506	MapMan:50.1.13	ProteinID:CBI38409	ProteinID:CBI38409.3
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	UniProt:D7U6N9	EMBL:FN596531
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0010268
GO:GO:0016020	GO:GO:0016021	GO:GO:0016125	GO:GO:0016132	GO:GO:0016491	GO:GO:0016705
GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100264506	wikigene:LOC100264506
PFAM:PF00067	PRINTS:PR00465	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF90	SUPFAM:SSF48264
TMHMM:TMhelix	UniParc:UPI0001BE5188	ArrayExpress:VIT_04s0210g00150	EnsemblPlantsGene:VIT_04s0210g00150	EnsemblPlants:VIT_04s0210g00150.t01	RefSeq:XP_002265422
RefSeq:XP_002265422.2	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:20522829..20529516

Molecular Weight (calculated)

57352.1 Da

IEP (calculated)

9.629

GRAVY (calculated)

-0.134

Length

504 amino acids

Sequence
(BLAST)

001: MQKNKHHRSS YGPNELSLCV VSLVIIWITY WIRRWKNPRC NVTLPPGSLG FPLIGESIQF LISCSNSLDL HPFFRKRIQK YGPLFKTSML GRQVVVTADP
101: EANHFILEQE GKSVEMCYLD SVAQLCGHDE SSAGATGHIH KYLRTLILNH FGYERLRYKL LKKVEAMAHK SLGAWSSQPS VELNRATSQI MLDFISKELF
201: SYDPKGCTES MGDAFIDFLD SLASVPLNIP GTTFHKCLKN QKKTMKILRE IVDERCASPE IRRGDFLDYF LEGMKKEAFI TKDFIAFVMF GLLFASFESI
301: PIMLSLALKL IMEHPLVLQE LKNEHEAILR NKDTSNFTLT WEDYKSMTFT LHVIDETLRM ANVGLGNFRK ALEDIKIKGH TIPAGWTILV VSSVLHMDPN
401: IYPDPLVFNP WRWKDGRSKI TTKNFTPFGG GIRFCPGAEL SKLTMAIFLH VAVTKYRFTK IKGGNLVRNP VLKFKDGFHI KVSKKMSHED GAEREAKSGS
501: VSIM

Best Arabidopsis Sequence Match ( AT1G12740.1 )
(BLAST)

001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD

Arabidopsis Description

CYP87A2Cytochrome P450, family 87, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:Q9LN73]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.