Factsheet for VIT_15s0048g01960.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g04080.t01	Wine grape	endoplasmic reticulum, vacuole	60.07	37.92
VIT_16s0100g00600.t01	Wine grape	endoplasmic reticulum	60.07	36.31
VIT_01s0011g00170.t01	Wine grape	endoplasmic reticulum	35.23	35.71
VIT_16s0100g00610.t01	Wine grape	endoplasmic reticulum, plasma membrane	54.7	34.03
VIT_18s0122g01480.t01	Wine grape	cytosol	50.0	33.94
CDX89543	Canola	cytosol	34.9	32.0
VIT_18s0001g00030.t01	Wine grape	extracellular, golgi, plasma membrane	49.66	31.09
VIT_18s0122g01460.t01	Wine grape	endoplasmic reticulum, extracellular, mitochondrion	49.33	30.88
VIT_18s0122g01470.t01	Wine grape	endoplasmic reticulum, extracellular	48.99	30.67
VIT_13s0067g00660.t01	Wine grape	cytosol	34.23	28.02
AT1G78490.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	43.29	26.93
Bra014144.1-P	Field mustard	extracellular, vacuole	40.6	26.48
CDY16450	Canola	extracellular, vacuole	40.6	26.48
VIT_04s0210g00160.t01	Wine grape	endoplasmic reticulum, golgi	43.29	26.01
AT3G44970.1	Thale cress	endoplasmic reticulum, extracellular	41.61	25.89
AT1G55940.2	Thale cress	endoplasmic reticulum	43.62	25.79
Bra028769.1-P	Field mustard	cytosol	35.23	25.61
VIT_04s0210g00150.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	43.29	25.6
CDY38927	Canola	endoplasmic reticulum, extracellular	41.28	25.52
Bra032183.1-P	Field mustard	endoplasmic reticulum, extracellular	40.94	25.31
Bra005843.1-P	Field mustard	endoplasmic reticulum, golgi	41.95	24.61
CDX80949	Canola	extracellular, golgi, plasma membrane	42.28	24.47
VIT_14s0083g01110.t01	Wine grape	endoplasmic reticulum, golgi	37.58	24.14
AT5G48000.1	Thale cress	endoplasmic reticulum	39.93	22.97
CDY49434	Canola	golgi, vacuole	36.58	22.95
CDX76894	Canola	extracellular, golgi, vacuole	36.58	22.95
VIT_01s0011g00190.t01	Wine grape	endoplasmic reticulum, golgi	35.23	22.68
VIT_14s0066g00170.t01	Wine grape	cytosol	30.2	22.61
VIT_12s0057g01460.t01	Wine grape	endoplasmic reticulum, golgi	34.9	22.03
VIT_04s0023g01630.t01	Wine grape	endoplasmic reticulum	29.87	21.81
Bra039931.1-P	Field mustard	golgi, vacuole	32.55	21.56
CDY38926	Canola	endoplasmic reticulum	34.9	20.93
VIT_09s0002g02080.t01	Wine grape	endoplasmic reticulum	32.21	20.21
VIT_16s0039g00290.t01	Wine grape	endoplasmic reticulum, golgi	32.21	19.75
Bra032184.1-P	Field mustard	extracellular, golgi	28.19	19.72
VIT_04s0023g02650.t01	Wine grape	endoplasmic reticulum, golgi	30.87	18.93
CDY04940	Canola	endoplasmic reticulum, extracellular	5.37	5.95
CDX89542	Canola	endoplasmic reticulum, extracellular	0.0	0.0

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100264301	wikigene:100264301	MapMan:50.1.13	ProteinID:CCB61334	ProteinID:CCB61334.1
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:F6I317	EMBL:FN596739
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0006629
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0010268	GO:GO:0016125
GO:GO:0016132	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	EntrezGene:LOC100264301	wikigene:LOC100264301	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF11	SUPFAM:SSF48264	UniParc:UPI00021088C9	ArrayExpress:VIT_15s0048g01960
EnsemblPlantsGene:VIT_15s0048g01960	EnsemblPlants:VIT_15s0048g01960.t01	RefSeq:XP_002269665	RefSeq:XP_002269665.2	:	:

Description

No Description!

Coordinates

chr15:+:16085964..16088384

Molecular Weight (calculated)

33647.0 Da

IEP (calculated)

9.235

GRAVY (calculated)

-0.066

Length

298 amino acids

Sequence
(BLAST)

001: MVFEYFAKKL FGYEEAKASK KLRESYKAFL DGLISFPLNI PGTAFHACLK GRENAIKVIN NVINERKSSQ KLCHDFLDFL LEEAKSKDTI LNEAIIVDLV
101: FLLLFASYET TSEAITLVMK FLSDHPSVVV ELTKEHEEIL KNRKNEELGI TWTEYKSMTF THMVINETLR LGNIVPGIFR GVTKDIEMKG TTIPAGSTVM
201: VCPSAVHLNP AKYNDPLAFD PWRWEGQELH AGSKNFVAFG GGSRLCAGAH FAKVQVAVFL HYLVTKYRWK KIRGGDIIRK PGLVFPDGLH IQISAKYK

Best Arabidopsis Sequence Match ( AT1G12740.1 )
(BLAST)

001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD

Arabidopsis Description

CYP87A2Cytochrome P450, family 87, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:Q9LN73]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.