Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38927 | Canola | endoplasmic reticulum, extracellular | 61.8 | 61.41 |
| Bra032183.1-P | Field mustard | endoplasmic reticulum, extracellular | 61.38 | 61.0 |
| CDY16450 | Canola | extracellular, vacuole | 56.58 | 59.3 |
| Bra014144.1-P | Field mustard | extracellular, vacuole | 56.58 | 59.3 |
| Bra032184.1-P | Field mustard | extracellular, golgi | 51.36 | 57.75 |
| AT3G44970.1 | Thale cress | endoplasmic reticulum, extracellular | 56.99 | 56.99 |
| CDX76894 | Canola | extracellular, golgi, vacuole | 56.37 | 56.84 |
| CDY49434 | Canola | golgi, vacuole | 55.95 | 56.42 |
| AT5G48000.1 | Thale cress | endoplasmic reticulum | 60.96 | 56.37 |
| Bra039931.1-P | Field mustard | golgi, vacuole | 51.98 | 55.33 |
| CDY38926 | Canola | endoplasmic reticulum | 56.99 | 54.93 |
| AT1G55940.2 | Thale cress | endoplasmic reticulum | 54.07 | 51.39 |
| VIT_15s0048g01960.t01 | Wine grape | cytosol | 26.93 | 43.29 |
| AT1G12740.4 | Thale cress | endoplasmic reticulum, extracellular | 39.46 | 39.54 |
| AT5G14400.2 | Thale cress | cytosol | 27.77 | 31.59 |
| AT5G05690.1 | Thale cress | endoplasmic reticulum | 29.85 | 30.3 |
| AT3G50660.1 | Thale cress | endoplasmic reticulum | 29.23 | 27.29 |
| AT4G36380.1 | Thale cress | cytosol, mitochondrion, nucleus, plasma membrane | 28.6 | 26.14 |
| AT3G13730.1 | Thale cress | extracellular, golgi | 25.26 | 24.64 |
| AT1G73340.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 25.05 | 24.64 |
| AT3G30180.1 | Thale cress | endoplasmic reticulum, golgi | 23.8 | 24.52 |
| AT5G38970.1 | Thale cress | endoplasmic reticulum, golgi | 22.55 | 23.23 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | EntrezGene:844185 | UniProt:A0A178WMR8 | ProteinID:AEE36112.1 | ArrayExpress:AT1G78490 |
| EnsemblPlantsGene:AT1G78490 | RefSeq:AT1G78490 | TAIR:AT1G78490 | RefSeq:AT1G78490-TAIR-G | EnsemblPlants:AT1G78490.1 | TAIR:AT1G78490.1 |
| EMBL:AY065073 | EMBL:BT006609 | Symbol:CYP708A3 | ncoils:Coil | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS |
| InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0006629 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0010268 |
| GO:GO:0016125 | GO:GO:0016132 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0020037 | GO:GO:0046872 |
| GO:GO:0055114 | InterPro:IPR036396 | RefSeq:NP_177970.1 | ProteinID:OAP19579.1 | PFAM:PF00067 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00463 |
| ScanProsite:PS00086 | PANTHER:PTHR24286 | PANTHER:PTHR24286:SF11 | UniProt:Q8VZC2 | SUPFAM:SSF48264 | SignalP:SignalP-noTM |
| UniParc:UPI00000A9789 | SEG:seg | : | : | : | : |
Description
CYP708A3CYP708A3 [Source:UniProtKB/TrEMBL;Acc:A0A178WMR8]
Coordinates
chr1:+:29526861..29530669
Molecular Weight (calculated)
54998.0 Da
IEP (calculated)
9.525
GRAVY (calculated)
-0.128
Length
479 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSIWNVAML MVALVVVRIS HWLYRWSNPK CPGKLPPGSM GFPIIGETLD FFKPCGVEGI PTFVKKRMIR YGPLFRTNIF GSKTVVSTDP DVIHQIFRQE
101: NTSFELGYPD IFVKVFGKDN LFLKEVFIHK YLQKITMQIL GSEGLKQTML GNMDKATRDH IRSIASQGSF NVRKEVENLV VAYMTPKLIS NLKPETQSKL
201: IDNLNAFNLD WFKSFLRLST WKAVTKALKS REEAIQVMKD VLMMRKETRE KQEDFLNTLL EELEKDGSFF DQGSAINLIF LLAFALREGT SSCTALAVKF
301: ISKDPKVLAE LKREHKAIVD NRKDKEAGVS WEEYRHNMTF TNMVSNEVLR LANTTPLLFR KAVQDVEIKG YTIPAGWIVA VAPSAVHFDP AIYENPFEFN
401: PWRWEGKEMI WGSKTFMAFG YGVRLCVGAE FSRLQMAIFL HHLVAYYDFS MVQDSEIIRS PFHQYTKDLL INISQSPTK
101: NTSFELGYPD IFVKVFGKDN LFLKEVFIHK YLQKITMQIL GSEGLKQTML GNMDKATRDH IRSIASQGSF NVRKEVENLV VAYMTPKLIS NLKPETQSKL
201: IDNLNAFNLD WFKSFLRLST WKAVTKALKS REEAIQVMKD VLMMRKETRE KQEDFLNTLL EELEKDGSFF DQGSAINLIF LLAFALREGT SSCTALAVKF
301: ISKDPKVLAE LKREHKAIVD NRKDKEAGVS WEEYRHNMTF TNMVSNEVLR LANTTPLLFR KAVQDVEIKG YTIPAGWIVA VAPSAVHFDP AIYENPFEFN
401: PWRWEGKEMI WGSKTFMAFG YGVRLCVGAE FSRLQMAIFL HHLVAYYDFS MVQDSEIIRS PFHQYTKDLL INISQSPTK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.