Factsheet for AT5G48000.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
vacuole 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 3
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G78490.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	56.37	60.96
AT3G44970.1	Thale cress	endoplasmic reticulum, extracellular	53.67	58.04
AT1G55940.2	Thale cress	endoplasmic reticulum	49.61	50.99
VIT_15s0048g01960.t01	Wine grape	cytosol	22.97	39.93
AT1G12740.4	Thale cress	endoplasmic reticulum, extracellular	36.1	39.12
AT5G14400.2	Thale cress	cytosol	24.71	30.4
AT5G05690.1	Thale cress	endoplasmic reticulum	27.41	30.08
AT3G30180.1	Thale cress	endoplasmic reticulum, golgi	24.32	27.1
AT3G50660.1	Thale cress	endoplasmic reticulum	26.45	26.71
AT5G38970.1	Thale cress	endoplasmic reticulum, golgi	23.36	26.02
AT4G36380.1	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	25.87	25.57
AT3G13730.1	Thale cress	extracellular, golgi	24.13	25.46
AT1G73340.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	23.75	25.26

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	EntrezGene:834851	ProteinID:AED95606.1	ArrayExpress:AT5G48000	EnsemblPlantsGene:AT5G48000
RefSeq:AT5G48000	TAIR:AT5G48000	RefSeq:AT5G48000-TAIR-G	EnsemblPlants:AT5G48000.1	TAIR:AT5G48000.1	Unigene:At.26827
Symbol:CYP708A2	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	UniProt:F4K051
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006629	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0048364	GO:GO:0055114	GO:GO:0080003
GO:GO:0080014	InterPro:IPR036396	RefSeq:NP_851152.1	PFAM:PF00067	PO:PO:0005052	PO:PO:0009005
PO:PO:0020100	PRINTS:PR00385	PRINTS:PR00465	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF11
SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI00000A8EF3	SEG:seg	:	:

Description

CYP708A2Cytochrome P450, family 708, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:F4K051]

Coordinates

chr5:-:19444138..19447866

Molecular Weight (calculated)

58880.8 Da

IEP (calculated)

9.506

GRAVY (calculated)

-0.076

Length

518 amino acids

Sequence
(BLAST)

001: MDRRGKYWAG PMWIGLSMCG SGSDTILECR LRLFKLQRQN QMSFVWSAAV WVIAVAAVVI SKWLYRWSNP KCNGKLPPGS MGLPIIGETC DFFEPHGLYE
101: ISPFVKKRML KYGPLFRTNI FGSNTVVLTE PDIIFEVFRQ ENKSFVFSYP EAFVKPFGKE NVFLKHGNIH KHVKQISLQH LGSEALKKKM IGEIDRVTYE
201: HLRSKANQGS FDAKEAVESV IMAHLTPKII SNLKPETQAT LVDNIMALGS EWFQSPLKLT TLISIYKVFI ARRYALQVIK DVFTRRKASR EMCGDFLDTM
301: VEEGEKEDVI FNEESAINLI FAILVVAKES TSSVTSLAIK FLAENHKALA ELKREHAAIL QNRNGKGAGV SWEEYRHQMT FTNMVINETL RMANMAPIMY
401: RKAVNDVEIK GYTIPAGWIV AVIPPAVHFN DAIYENPLEF NPWRWEGKEL RSGSKTFMVF GGGVRQCVGA EFARLQISIF IHHLVTTYDF SLAQESEFIR
501: APLPYFPKGL PIKISQSL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.