Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 7
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89542 | Canola | endoplasmic reticulum, extracellular | 10.32 | 62.65 |
| AT1G78490.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 51.39 | 54.07 |
| AT3G44970.1 | Thale cress | endoplasmic reticulum, extracellular | 50.79 | 53.44 |
| AT5G48000.1 | Thale cress | endoplasmic reticulum | 50.99 | 49.61 |
| CDX89543 | Canola | cytosol | 28.57 | 44.31 |
| VIT_15s0048g01960.t01 | Wine grape | cytosol | 25.79 | 43.62 |
| AT1G12740.4 | Thale cress | endoplasmic reticulum, extracellular | 39.29 | 41.42 |
| AT5G14400.2 | Thale cress | cytosol | 27.38 | 32.78 |
| AT5G05690.1 | Thale cress | endoplasmic reticulum | 28.77 | 30.72 |
| AT3G50660.1 | Thale cress | endoplasmic reticulum | 30.95 | 30.41 |
| AT3G30180.1 | Thale cress | endoplasmic reticulum, golgi | 27.78 | 30.11 |
| AT5G38970.1 | Thale cress | endoplasmic reticulum, golgi | 26.39 | 28.6 |
| AT3G13730.1 | Thale cress | extracellular, golgi | 27.18 | 27.9 |
| AT4G36380.1 | Thale cress | cytosol, mitochondrion, nucleus, plasma membrane | 28.57 | 27.48 |
| AT1G73340.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 24.8 | 25.67 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | EntrezGene:842045 | UniProt:A0A1P8AVV5 | ProteinID:ANM60788.1 | ArrayExpress:AT1G55940 |
| EnsemblPlantsGene:AT1G55940 | RefSeq:AT1G55940 | TAIR:AT1G55940 | RefSeq:AT1G55940-TAIR-G | EnsemblPlants:AT1G55940.2 | Symbol:CYP708A1 |
| InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-IV | InterPro:Cyt_P450_sf | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0020037 | GO:GO:0046872 |
| GO:GO:0055114 | InterPro:IPR036396 | RefSeq:NP_001323049.1 | PFAM:PF00067 | PRINTS:PR00385 | PRINTS:PR00465 |
| ScanProsite:PS00086 | PANTHER:PTHR24286 | PANTHER:PTHR24286:SF11 | SUPFAM:SSF48264 | TMHMM:TMhelix | UniParc:UPI00084901FF |
Description
CYP708A1cytochrome P450, family 708, subfamily A, polypeptide 1 [Source:TAIR;Acc:AT1G55940]
Coordinates
chr1:-:20922342..20924583
Molecular Weight (calculated)
58053.9 Da
IEP (calculated)
8.631
GRAVY (calculated)
-0.106
Length
504 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNLISLDIM KEMWGVALSF VIALVVVKIS LWLYRWANPN CSGKLPPGSM GFPVIGETVE FFKPYSFNEI HPFVKKRMFK HGGSLFRTNI LGSKTIVSTD
101: PEVNFEILKQ ENRCFIMSYP EALVRIFGKD NLFFKQGKDF HRYMRHIALQ LLGPECLKQR FIQQIDIATS EHLKSVSFQG VVDVKDTSGR LILEQMILMI
201: ISNIKPETKS KLIESFRDFS FDLVRSPFDP SFWNALYNGL MARSNVMKML KRMFKERREE ATSDDSKYGD FMETMIYEVE KEGDTINEER SVELILSLLI
301: ASYETTSTMT ALTVKFIAEN PKVLMELKRE HETILQNRAD KESGVTWKEY RSMMNFTHMV INESLRLGSL SPAMFRKAVN DVEIKGYTIP AGWIVLVVPS
401: LLHYDPQIYE QPCEFNPWRW EGKELLSGSK TFMAFGGGAR LCAGAEFARL QMAIFLHHLV TTYDFSLIDK SYIIRAPLLR FSKPIRITIS ENPLSSSHQN
501: ANLF
101: PEVNFEILKQ ENRCFIMSYP EALVRIFGKD NLFFKQGKDF HRYMRHIALQ LLGPECLKQR FIQQIDIATS EHLKSVSFQG VVDVKDTSGR LILEQMILMI
201: ISNIKPETKS KLIESFRDFS FDLVRSPFDP SFWNALYNGL MARSNVMKML KRMFKERREE ATSDDSKYGD FMETMIYEVE KEGDTINEER SVELILSLLI
301: ASYETTSTMT ALTVKFIAEN PKVLMELKRE HETILQNRAD KESGVTWKEY RSMMNFTHMV INESLRLGSL SPAMFRKAVN DVEIKGYTIP AGWIVLVVPS
401: LLHYDPQIYE QPCEFNPWRW EGKELLSGSK TFMAFGGGAR LCAGAEFARL QMAIFLHHLV TTYDFSLIDK SYIIRAPLLR FSKPIRITIS ENPLSSSHQN
501: ANLF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.