Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 2
- vacuole 3
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72982 | Canola | endoplasmic reticulum, golgi | 89.73 | 90.29 |
| CDX96469 | Canola | endoplasmic reticulum, golgi | 89.53 | 90.08 |
| Bra015998.1-P | Field mustard | endoplasmic reticulum, golgi | 89.12 | 89.86 |
| KRH38830 | Soybean | endoplasmic reticulum, golgi | 71.66 | 71.66 |
| KRH09326 | Soybean | endoplasmic reticulum, golgi | 70.64 | 70.93 |
| PGSC0003DMT400039514 | Potato | endoplasmic reticulum, golgi | 68.38 | 69.38 |
| VIT_16s0039g00290.t01 | Wine grape | endoplasmic reticulum, golgi | 68.17 | 68.31 |
| Solyc03g019870.2.1 | Tomato | extracellular | 67.15 | 68.12 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 63.04 | 58.93 |
| AT5G05690.1 | Thale cress | endoplasmic reticulum | 34.7 | 35.81 |
| AT3G50660.1 | Thale cress | endoplasmic reticulum | 36.14 | 34.31 |
| AT5G14400.2 | Thale cress | cytosol | 28.95 | 33.49 |
| AT3G13730.1 | Thale cress | extracellular, golgi | 31.21 | 30.96 |
| AT5G38970.1 | Thale cress | endoplasmic reticulum, golgi | 29.36 | 30.75 |
| AT3G30180.1 | Thale cress | endoplasmic reticulum, golgi | 28.54 | 29.89 |
| AT1G12740.4 | Thale cress | endoplasmic reticulum, extracellular | 28.75 | 29.29 |
| AT4G36380.1 | Thale cress | cytosol, mitochondrion, nucleus, plasma membrane | 30.8 | 28.63 |
| AT3G44970.1 | Thale cress | endoplasmic reticulum, extracellular | 26.28 | 26.72 |
| AT1G78490.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 24.64 | 25.05 |
| AT1G55940.2 | Thale cress | endoplasmic reticulum | 25.67 | 24.8 |
| AT5G48000.1 | Thale cress | endoplasmic reticulum | 25.26 | 23.75 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | EntrezGene:843669 | UniProt:A0A178WHC7 | ProteinID:AEE35445.2 | ArrayExpress:AT1G73340 |
| EnsemblPlantsGene:AT1G73340 | RefSeq:AT1G73340 | TAIR:AT1G73340 | RefSeq:AT1G73340-TAIR-G | EnsemblPlants:AT1G73340.1 | TAIR:AT1G73340.1 |
| InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-IV | InterPro:Cyt_P450_sf | UniProt:F4HQ70 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0006629 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0010268 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016125 | GO:GO:0016132 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0020037 |
| GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036396 | RefSeq:NP_001319373.1 | ProteinID:OAP17740.1 | PFAM:PF00067 |
| PO:PO:0009005 | PRINTS:PR00385 | PRINTS:PR00465 | ScanProsite:PS00086 | PANTHER:PTHR24286 | PANTHER:PTHR24286:SF154 |
| SUPFAM:SSF48264 | TMHMM:TMhelix | UniParc:UPI00017390D2 | SEG:seg | : | : |
Description
Cytochrome P450 superfamily protein [Source:TAIR;Acc:AT1G73340]
Coordinates
chr1:+:27573114..27575273
Molecular Weight (calculated)
55471.0 Da
IEP (calculated)
8.683
GRAVY (calculated)
-0.179
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESAGESYR LLSVSSSTTF LAFIIIFLLA GIARRKRRAP HRLPPGSRGW PLIGDTFAWL NAVAGSHPSS FVEKQIKKYG RIFSCSLFGK WAVVSADPDF
101: NRFIMQNEGK LFQSSYPKSF RDLVGKDGVI TVHGDQQRRL HSIASSMMRH DQLKTHFLEV IPVVMLQTLS NFKDGEVVLL QDICRKVAIH LMVNQLLGVS
201: SESEVDEMSQ LFSDFVDGCL SVPIDLPGFT YNKAMKARKE IIRKINKTIE KRLQNKAASD TAGNGVLGRL LEEESLPNES MADFIINLLF AGNETTSKTM
301: LFAVYFLTHC PKAMTQLLEE HDRLAGGMLT WQDYKTMDFT QCVIDETLRL GGIAIWLMRE AKEDVSYQDY VIPKGCFVVP FLSAVHLDES YYKESLSFNP
401: WRWLDPETQQ KRNWRTSPFY CPFGGGTRFC PGAELARLQI ALFLHYFITT YKWTQLKEDR ISFFPSARLV NGFKIQLNRR DSDPPNQ
101: NRFIMQNEGK LFQSSYPKSF RDLVGKDGVI TVHGDQQRRL HSIASSMMRH DQLKTHFLEV IPVVMLQTLS NFKDGEVVLL QDICRKVAIH LMVNQLLGVS
201: SESEVDEMSQ LFSDFVDGCL SVPIDLPGFT YNKAMKARKE IIRKINKTIE KRLQNKAASD TAGNGVLGRL LEEESLPNES MADFIINLLF AGNETTSKTM
301: LFAVYFLTHC PKAMTQLLEE HDRLAGGMLT WQDYKTMDFT QCVIDETLRL GGIAIWLMRE AKEDVSYQDY VIPKGCFVVP FLSAVHLDES YYKESLSFNP
401: WRWLDPETQQ KRNWRTSPFY CPFGGGTRFC PGAELARLQI ALFLHYFITT YKWTQLKEDR ISFFPSARLV NGFKIQLNRR DSDPPNQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.