Factsheet for AT4G36380.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59695	Canola	golgi	83.78	86.93
Bra011678.1-P	Field mustard	extracellular, golgi	85.11	86.77
CDX75570	Canola	cytosol, golgi, plastid	86.64	86.15
CDY64922	Canola	plasma membrane	85.31	82.47
CDX69220	Canola	golgi, peroxisome, plastid	67.37	81.15
Bra017757.1-P	Field mustard	plasma membrane	73.28	80.0
VIT_04s0023g02650.t01	Wine grape	endoplasmic reticulum, golgi	59.16	63.79
Solyc02g084740.2.1	Tomato	cytosol	58.02	61.54
PGSC0003DMT400009094	Potato	cytosol, golgi	57.82	61.34
KRH69829	Soybean	extracellular, golgi	56.11	60.49
KRH28742	Soybean	endoplasmic reticulum, extracellular	55.92	59.43
KRH76714	Soybean	endoplasmic reticulum, extracellular	48.66	55.43
AT3G13730.1	Thale cress	extracellular, golgi	45.23	48.27
AT5G05690.1	Thale cress	endoplasmic reticulum	37.02	41.1
AT5G14400.2	Thale cress	cytosol	27.1	33.73
AT3G50660.1	Thale cress	endoplasmic reticulum	32.63	33.33
AT1G73340.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	28.63	30.8
AT5G38970.1	Thale cress	endoplasmic reticulum, golgi	27.29	30.75
AT3G30180.1	Thale cress	endoplasmic reticulum, golgi	27.29	30.75
AT1G12740.4	Thale cress	endoplasmic reticulum, extracellular	26.72	29.29
AT3G44970.1	Thale cress	endoplasmic reticulum, extracellular	26.34	28.81
AT1G78490.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	26.14	28.6
AT1G55940.2	Thale cress	endoplasmic reticulum	27.48	28.57
AT5G48000.1	Thale cress	endoplasmic reticulum	25.57	25.87

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.3.1.4	EntrezGene:829790	UniProt:A0A178V4B0	EMBL:AB008097	ProteinID:AEE86649.1
EMBL:AK228126	ArrayExpress:AT4G36380	EnsemblPlantsGene:AT4G36380	RefSeq:AT4G36380	TAIR:AT4G36380	RefSeq:AT4G36380-TAIR-G
EnsemblPlants:AT4G36380.1	TAIR:AT4G36380.1	Unigene:At.19730	EMBL:BT029220	ProteinID:CAA18139.1	ProteinID:CAB16850.1
ProteinID:CAB80304.1	ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf
GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789
GO:GO:0006629	GO:GO:0006694	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009965	GO:GO:0009987	GO:GO:0010268
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016049	GO:GO:0016125	GO:GO:0016132
GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0020037	GO:GO:0040007	GO:GO:0042814
GO:GO:0046872	GO:GO:0048366	GO:GO:0048441	GO:GO:0048443	GO:GO:0055114	GO:GO:0102097
InterPro:IPR036396	RefSeq:NP_568002.1	ProteinID:OAP00478.1	PFAM:PF00067	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020100
PO:PO:0025022	PO:PO:0025281	PRINTS:PR00385	PRINTS:PR00465	ScanProsite:PS00086	PANTHER:PTHR24286
PANTHER:PTHR24286:SF79	UniProt:Q9M066	Symbol:ROT3	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI0000162BA4
SEG:seg	:	:	:	:	:

Description

ROT3ROT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4B0]

Coordinates

chr4:-:17187528..17192507

Molecular Weight (calculated)

59359.2 Da

IEP (calculated)

7.009

GRAVY (calculated)

-0.184

Length

524 amino acids

Sequence
(BLAST)

001: MQPPASAGLF RSPENLPWPY NYMDYLVAGF LVLTAGILLR PWLWLRLRNS KTKDGDEEED NEEKKKGMIP NGSLGWPVIG ETLNFIACGY SSRPVTFMDK
101: RKSLYGKVFK TNIIGTPIII STDAEVNKVV LQNHGNTFVP AYPKSITELL GENSILSING PHQKRLHTLI GAFLRSPHLK DRITRDIEAS VVLTLASWAQ
201: LPLVHVQDEI KKMTFEILVK VLMSTSPGED MNILKLEFEE FIKGLICIPI KFPGTRLYKS LKAKERLIKM VKKVVEERQV AMTTTSPAND VVDVLLRDGG
301: DSEKQSQPSD FVSGKIVEMM IPGEETMPTA MTLAVKFLSD NPVALAKLVE ENMEMKRRKL ELGEEYKWTD YMSLSFTQNV INETLRMANI INGVWRKALK
401: DVEIKGYLIP KGWCVLASFI SVHMDEDIYD NPYQFDPWRW DRINGSANSS ICFTPFGGGQ RLCPGLELSK LEISIFLHHL VTRYSWTAEE DEIVSFPTVK
501: MKRRLPIRVA TVDDSASPIS LEDH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.