Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011678.1-P | Field mustard | extracellular, golgi | 94.31 | 96.69 |
| CDX69220 | Canola | golgi, peroxisome, plastid | 77.42 | 93.79 |
| CDY59695 | Canola | golgi | 84.82 | 88.51 |
| AT4G36380.1 | Thale cress | cytosol, mitochondrion, nucleus, plasma membrane | 86.15 | 86.64 |
| CDY64922 | Canola | plasma membrane | 86.72 | 84.32 |
| VIT_04s0023g02650.t01 | Wine grape | endoplasmic reticulum, golgi | 58.44 | 63.37 |
| KRH69829 | Soybean | extracellular, golgi | 56.74 | 61.52 |
| Solyc02g084740.2.1 | Tomato | cytosol | 56.17 | 59.92 |
| PGSC0003DMT400009094 | Potato | cytosol, golgi | 55.98 | 59.72 |
| KRH28742 | Soybean | endoplasmic reticulum, extracellular | 55.6 | 59.43 |
| KRH76714 | Soybean | endoplasmic reticulum, extracellular | 48.58 | 55.65 |
| CDY37485 | Canola | extracellular, golgi | 45.92 | 49.19 |
| CDY51737 | Canola | endoplasmic reticulum, golgi | 45.73 | 48.98 |
| CDX97511 | Canola | extracellular, golgi | 44.97 | 48.27 |
| CDY04961 | Canola | cytosol | 19.54 | 45.37 |
| CDX98856 | Canola | endoplasmic reticulum, golgi | 37.76 | 41.46 |
| CDX70137 | Canola | endoplasmic reticulum, golgi | 37.57 | 41.25 |
| CDY14104 | Canola | endoplasmic reticulum | 36.62 | 40.55 |
| CDY23635 | Canola | endoplasmic reticulum, golgi | 26.19 | 40.23 |
| CDY11332 | Canola | endoplasmic reticulum, golgi | 35.86 | 39.46 |
| CDX80969 | Canola | endoplasmic reticulum | 33.21 | 37.96 |
| CDY26518 | Canola | mitochondrion | 19.92 | 36.59 |
| CDX99676 | Canola | cytosol | 15.37 | 35.06 |
| CDX69583 | Canola | cytosol | 28.65 | 34.71 |
| CDX91063 | Canola | cytosol | 28.27 | 34.25 |
| CDY49400 | Canola | endoplasmic reticulum, golgi | 32.07 | 34.21 |
| CDX85598 | Canola | cytosol | 28.08 | 34.18 |
| CDX77934 | Canola | endoplasmic reticulum, golgi | 32.07 | 34.14 |
| CDY24488 | Canola | endoplasmic reticulum, golgi | 31.69 | 33.74 |
| CDY09852 | Canola | endoplasmic reticulum, extracellular | 29.98 | 33.26 |
| CDY00084 | Canola | endoplasmic reticulum, golgi | 27.7 | 31.4 |
| CDY26591 | Canola | extracellular, golgi, plasma membrane | 26.95 | 30.87 |
| CDX86355 | Canola | golgi | 27.13 | 30.75 |
| CDY19979 | Canola | endoplasmic reticulum, golgi | 27.13 | 30.75 |
| CDY66605 | Canola | endoplasmic reticulum, extracellular | 27.51 | 30.59 |
| CDX96469 | Canola | endoplasmic reticulum, golgi | 28.08 | 30.58 |
| CDY16028 | Canola | extracellular, golgi | 27.32 | 30.44 |
| CDX72982 | Canola | endoplasmic reticulum, golgi | 27.89 | 30.37 |
| CDY60267 | Canola | extracellular, golgi | 27.13 | 30.23 |
| CDX99675 | Canola | endoplasmic reticulum | 26.57 | 30.11 |
| CDY35786 | Canola | endoplasmic reticulum, golgi | 26.0 | 29.65 |
| CDY66116 | Canola | endoplasmic reticulum, golgi | 26.0 | 29.65 |
| CDX89542 | Canola | endoplasmic reticulum, extracellular | 4.55 | 28.92 |
| CDX85284 | Canola | endoplasmic reticulum, golgi | 19.54 | 27.84 |
| CDY16450 | Canola | extracellular, vacuole | 23.34 | 26.91 |
| CDY38927 | Canola | endoplasmic reticulum, extracellular | 23.72 | 25.93 |
| CDX89543 | Canola | cytosol | 15.94 | 25.85 |
| CDX80949 | Canola | extracellular, golgi, plasma membrane | 25.05 | 25.63 |
| CDY15962 | Canola | endoplasmic reticulum, plasma membrane | 22.39 | 25.38 |
| CDY38926 | Canola | endoplasmic reticulum | 22.96 | 24.35 |
| CDY49434 | Canola | golgi, vacuole | 21.44 | 23.79 |
| CDX76894 | Canola | extracellular, golgi, vacuole | 21.06 | 23.37 |
| CDY04940 | Canola | endoplasmic reticulum, extracellular | 11.01 | 21.56 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:11.3.1.4 | GO:A0A078CFG8 | EnsemblPlants:CDX75570 | ProteinID:CDX75570 | ProteinID:CDX75570.1 |
| ncoils:Coil | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-IV | InterPro:Cyt_P450_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016705 | GO:GO:0020037 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00121476001 | InterPro:IPR036396 | PFAM:PF00067 |
| PRINTS:PR00385 | PRINTS:PR00465 | ScanProsite:PS00086 | PANTHER:PTHR24286 | PANTHER:PTHR24286:SF79 | SUPFAM:SSF48264 |
| TMHMM:TMhelix | UniParc:UPI0004EE9512 | SEG:seg | : | : | : |
Description
BnaA01g01320D
Coordinates
chrLK031804:-:1722299..1728246
Molecular Weight (calculated)
59836.8 Da
IEP (calculated)
8.068
GRAVY (calculated)
-0.174
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSPANLSLF RSPENLYSPS GFMDYWIAGF LVLTAEVLLL SWLWFRLTHS KTRDEDKQEE SEKKKGMIPK GSLGWPVIGE TLTFIACGYS SRPVSFMDKR
101: KSLYGKVFKT NIIGTPIIIS TDAEVNKVVL QNHGNTFVPA YPKSITELLG ENSILSINGA HQKRLHTLIS AFLRSPHLKE RITRDIEASV ALTLASWSQL
201: PLVHVQDEIK KMTFEILVKL LMSISPGDDL DILKLEFQEF IKGLICIPIK FPGTRLHKSL KAKERLIKIV KKVVEERQEA TTESTNCPAN DAVDVLLRDV
301: NDGGCSDKQS HPLDFVSGKI VEMMIPGEET MPTAMTLAVK FLSDNPVALA KLVEENMEMK RRKLESGKEY GWSDYMSLSF TQNVINETLR MANIINGVWR
401: KALKDVEIKG YLIPKGWCVL ASFISVHMDE DIYENPYQFD QWRWDRINGT TNSNICFTPF GGGQRLCPGL ELSKLEISIF LHQLVTRFSW TAEKDEIVSF
501: PTVKMKRRLP IRVTPVERTS PISVEDH
101: KSLYGKVFKT NIIGTPIIIS TDAEVNKVVL QNHGNTFVPA YPKSITELLG ENSILSINGA HQKRLHTLIS AFLRSPHLKE RITRDIEASV ALTLASWSQL
201: PLVHVQDEIK KMTFEILVKL LMSISPGDDL DILKLEFQEF IKGLICIPIK FPGTRLHKSL KAKERLIKIV KKVVEERQEA TTESTNCPAN DAVDVLLRDV
301: NDGGCSDKQS HPLDFVSGKI VEMMIPGEET MPTAMTLAVK FLSDNPVALA KLVEENMEMK RRKLESGKEY GWSDYMSLSF TQNVINETLR MANIINGVWR
401: KALKDVEIKG YLIPKGWCVL ASFISVHMDE DIYENPYQFD QWRWDRINGT TNSNICFTPF GGGQRLCPGL ELSKLEISIF LHQLVTRFSW TAEKDEIVSF
501: PTVKMKRRLP IRVTPVERTS PISVEDH
001: MQPPASAGLF RSPENLPWPY NYMDYLVAGF LVLTAGILLR PWLWLRLRNS KTKDGDEEED NEEKKKGMIP NGSLGWPVIG ETLNFIACGY SSRPVTFMDK
101: RKSLYGKVFK TNIIGTPIII STDAEVNKVV LQNHGNTFVP AYPKSITELL GENSILSING PHQKRLHTLI GAFLRSPHLK DRITRDIEAS VVLTLASWAQ
201: LPLVHVQDEI KKMTFEILVK VLMSTSPGED MNILKLEFEE FIKGLICIPI KFPGTRLYKS LKAKERLIKM VKKVVEERQV AMTTTSPAND VVDVLLRDGG
301: DSEKQSQPSD FVSGKIVEMM IPGEETMPTA MTLAVKFLSD NPVALAKLVE ENMEMKRRKL ELGEEYKWTD YMSLSFTQNV INETLRMANI INGVWRKALK
401: DVEIKGYLIP KGWCVLASFI SVHMDEDIYD NPYQFDPWRW DRINGSANSS ICFTPFGGGQ RLCPGLELSK LEISIFLHHL VTRYSWTAEE DEIVSFPTVK
501: MKRRLPIRVA TVDDSASPIS LEDH
101: RKSLYGKVFK TNIIGTPIII STDAEVNKVV LQNHGNTFVP AYPKSITELL GENSILSING PHQKRLHTLI GAFLRSPHLK DRITRDIEAS VVLTLASWAQ
201: LPLVHVQDEI KKMTFEILVK VLMSTSPGED MNILKLEFEE FIKGLICIPI KFPGTRLYKS LKAKERLIKM VKKVVEERQV AMTTTSPAND VVDVLLRDGG
301: DSEKQSQPSD FVSGKIVEMM IPGEETMPTA MTLAVKFLSD NPVALAKLVE ENMEMKRRKL ELGEEYKWTD YMSLSFTQNV INETLRMANI INGVWRKALK
401: DVEIKGYLIP KGWCVLASFI SVHMDEDIYD NPYQFDPWRW DRINGSANSS ICFTPFGGGQ RLCPGLELSK LEISIFLHHL VTRYSWTAEE DEIVSFPTVK
501: MKRRLPIRVA TVDDSASPIS LEDH
Arabidopsis Description
ROT3ROT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4B0]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.