CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

cytosol 1
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032183.1-P	Field mustard	endoplasmic reticulum, extracellular	99.17	99.17
CDX89542	Canola	endoplasmic reticulum, extracellular	14.52	84.34
CDY38926	Canola	endoplasmic reticulum	80.91	78.47
CDX89543	Canola	cytosol	52.28	77.54
CDY16450	Canola	extracellular, vacuole	67.01	70.68
CDX76894	Canola	extracellular, golgi, vacuole	67.43	68.42
CDY49434	Canola	golgi, vacuole	67.22	68.21
AT1G78490.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	61.41	61.8
CDY04940	Canola	endoplasmic reticulum, extracellular	31.12	55.76
CDX80949	Canola	extracellular, golgi, plasma membrane	54.36	50.87
VIT_15s0048g01960.t01	Wine grape	cytosol	25.52	41.28
CDY16028	Canola	extracellular, golgi	38.8	39.53
CDY26591	Canola	extracellular, golgi, plasma membrane	37.55	39.35
CDY66605	Canola	endoplasmic reticulum, extracellular	38.59	39.24
CDY60267	Canola	extracellular, golgi	38.38	39.11
CDY04961	Canola	cytosol	15.15	32.16
CDX99676	Canola	cytosol	15.15	31.6
CDY26518	Canola	mitochondrion	18.46	31.01
CDX69583	Canola	cytosol	26.56	29.43
CDX91063	Canola	cytosol	26.56	29.43
CDX85598	Canola	cytosol	26.35	29.33
CDY14104	Canola	endoplasmic reticulum	27.8	28.15
CDY09852	Canola	endoplasmic reticulum, extracellular	27.59	28.0
CDY49400	Canola	endoplasmic reticulum, golgi	28.42	27.73
CDY11332	Canola	endoplasmic reticulum, golgi	27.39	27.56
CDX70137	Canola	endoplasmic reticulum, golgi	27.39	27.5
CDX98856	Canola	endoplasmic reticulum, golgi	27.39	27.5
CDX77934	Canola	endoplasmic reticulum, golgi	27.59	26.87
CDY24488	Canola	endoplasmic reticulum, golgi	27.59	26.87
CDX80969	Canola	endoplasmic reticulum	25.31	26.46
CDX99675	Canola	endoplasmic reticulum	25.52	26.45
CDY59695	Canola	golgi	26.97	25.74
CDY00084	Canola	endoplasmic reticulum, golgi	24.69	25.59
CDX86355	Canola	golgi	24.48	25.38
CDY19979	Canola	endoplasmic reticulum, golgi	24.27	25.16
CDX72982	Canola	endoplasmic reticulum, golgi	25.1	25.0
CDY35786	Canola	endoplasmic reticulum, golgi	23.86	24.89
CDX96469	Canola	endoplasmic reticulum, golgi	24.9	24.79
CDY66116	Canola	endoplasmic reticulum, golgi	23.65	24.68
CDX97511	Canola	extracellular, golgi	24.69	24.24
CDY64922	Canola	plasma membrane	27.18	24.17
CDY37485	Canola	extracellular, golgi	24.48	23.98
CDY51737	Canola	endoplasmic reticulum, golgi	24.48	23.98
CDX75570	Canola	cytosol, golgi, plastid	25.93	23.72
CDY15962	Canola	endoplasmic reticulum, plasma membrane	22.41	23.23
CDX85284	Canola	endoplasmic reticulum, golgi	17.43	22.7
CDX69220	Canola	golgi, peroxisome, plastid	19.29	21.38
CDY23635	Canola	endoplasmic reticulum, golgi	13.07	18.37

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	GO:A0A078HM00	UniProt:A0A078HM00	EnsemblPlants:CDY38927	ProteinID:CDY38927
ProteinID:CDY38927.1	ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00066968001	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00465	ScanProsite:PS00086
PANTHER:PTHR24286	PANTHER:PTHR24286:SF11	SUPFAM:SSF48264	SignalP:SignalP-noTM	UniParc:UPI0004EE67A7	:

Description

BnaA04g13480DBnaA04g13480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HM00]

Coordinates

chrLK032435:+:74209..79050

Molecular Weight (calculated)

55255.4 Da

IEP (calculated)

9.532

GRAVY (calculated)

-0.159

Length

482 amino acids

Sequence
(BLAST)

001: MMSFMWNIEV LVIALVVVRI SHWLYQWSNP NVRCSGKLPP GSMGFPLIGE TVDFFKPCGF LEIPSFFQNR MQRYGSLFRT NIMGSKTVIC TDSDVIFEIF
101: RQENQSFEHS YPDVFVKVLG KDNLFFKTGD IHKHLKKTTM HLIGSEGLKI NMIRSMNQAT RQHLNWKASE GTFDLRDAVS SLISSYMTPK LISNLKTEPR
201: AKLIDHFKAF NLDWIRSPFA PSTWKIIYDV LKARKGAMQV IKEALKKRKE SREQHGDFLD TLLEEMEKEG SIYDEASVIN LLLTIGVISK DTTSVATALM
301: VNLLFKNPKV LTELKREHEA ILQKREDKEA GVSWEEYKYN MTFTNMVINE SLRLSNLGSI LFRKALKDVE IKGYTIPAGW IVAVAPSVVH YNSQIYEKPL
401: DFNPWRWEGK DLRSVTKTLM VFGGGTRQCV GADFAKLQMT VFLHHLVTTY DFSVVQACEM TRTPFPCITK DLLINISPKS PK

Best Arabidopsis Sequence Match ( AT1G78490.1 )
(BLAST)

001: MSSIWNVAML MVALVVVRIS HWLYRWSNPK CPGKLPPGSM GFPIIGETLD FFKPCGVEGI PTFVKKRMIR YGPLFRTNIF GSKTVVSTDP DVIHQIFRQE
101: NTSFELGYPD IFVKVFGKDN LFLKEVFIHK YLQKITMQIL GSEGLKQTML GNMDKATRDH IRSIASQGSF NVRKEVENLV VAYMTPKLIS NLKPETQSKL
201: IDNLNAFNLD WFKSFLRLST WKAVTKALKS REEAIQVMKD VLMMRKETRE KQEDFLNTLL EELEKDGSFF DQGSAINLIF LLAFALREGT SSCTALAVKF
301: ISKDPKVLAE LKREHKAIVD NRKDKEAGVS WEEYRHNMTF TNMVSNEVLR LANTTPLLFR KAVQDVEIKG YTIPAGWIVA VAPSAVHFDP AIYENPFEFN
401: PWRWEGKEMI WGSKTFMAFG YGVRLCVGAE FSRLQMAIFL HHLVAYYDFS MVQDSEIIRS PFHQYTKDLL INISQSPTK

Arabidopsis Description

CYP708A3CYP708A3 [Source:UniProtKB/TrEMBL;Acc:A0A178WMR8]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.