CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032184.1-P	Field mustard	extracellular, golgi	85.11	99.3
CDX89542	Canola	endoplasmic reticulum, extracellular	16.5	98.8
CDX89543	Canola	cytosol	63.38	96.92
CDY38927	Canola	endoplasmic reticulum, extracellular	78.47	80.91
CDY16450	Canola	extracellular, vacuole	61.97	67.4
CDX76894	Canola	extracellular, golgi, vacuole	61.37	64.21
CDY49434	Canola	golgi, vacuole	61.17	64.0
CDY04940	Canola	endoplasmic reticulum, extracellular	31.19	57.62
AT1G78490.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	54.93	56.99
CDX80949	Canola	extracellular, golgi, plasma membrane	50.1	48.35
CDY16028	Canola	extracellular, golgi	34.21	35.94
CDY60267	Canola	extracellular, golgi	33.8	35.52
CDY26591	Canola	extracellular, golgi, plasma membrane	32.8	35.43
CDY66605	Canola	endoplasmic reticulum, extracellular	33.6	35.23
VIT_15s0048g01960.t01	Wine grape	cytosol	20.93	34.9
CDY04961	Canola	cytosol	13.88	30.4
CDY26518	Canola	mitochondrion	16.3	28.22
CDX91063	Canola	cytosol	24.14	27.59
CDY14104	Canola	endoplasmic reticulum	26.36	27.52
CDX85598	Canola	cytosol	23.94	27.48
CDY11332	Canola	endoplasmic reticulum, golgi	26.16	27.14
CDX69583	Canola	cytosol	23.74	27.13
CDX99676	Canola	cytosol	12.47	26.84
CDX98856	Canola	endoplasmic reticulum, golgi	25.55	26.46
CDX70137	Canola	endoplasmic reticulum, golgi	25.55	26.46
CDY49400	Canola	endoplasmic reticulum, golgi	26.16	26.32
CDY09852	Canola	endoplasmic reticulum, extracellular	24.95	26.11
CDX80969	Canola	endoplasmic reticulum	23.94	25.81
CDX77934	Canola	endoplasmic reticulum, golgi	25.35	25.45
CDY24488	Canola	endoplasmic reticulum, golgi	25.35	25.45
CDX99675	Canola	endoplasmic reticulum	23.34	24.95
CDX97511	Canola	extracellular, golgi	24.55	24.85
CDY51737	Canola	endoplasmic reticulum, golgi	24.14	24.39
CDX85284	Canola	endoplasmic reticulum, golgi	18.11	24.32
CDX86355	Canola	golgi	22.74	24.3
CDY37485	Canola	extracellular, golgi	23.94	24.19
CDY59695	Canola	golgi	24.55	24.16
CDY00084	Canola	endoplasmic reticulum, golgi	22.54	24.09
CDY19979	Canola	endoplasmic reticulum, golgi	22.13	23.66
CDY35786	Canola	endoplasmic reticulum, golgi	21.73	23.38
CDX75570	Canola	cytosol, golgi, plastid	24.35	22.96
CDX72982	Canola	endoplasmic reticulum, golgi	22.13	22.73
CDY66116	Canola	endoplasmic reticulum, golgi	21.13	22.73
CDY64922	Canola	plasma membrane	24.75	22.69
CDX96469	Canola	endoplasmic reticulum, golgi	21.93	22.52
CDX69220	Canola	golgi, peroxisome, plastid	19.32	22.07
CDY15962	Canola	endoplasmic reticulum, plasma membrane	20.12	21.51
CDY23635	Canola	endoplasmic reticulum, golgi	14.29	20.7

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	GO:A0A078HMU2	UniProt:A0A078HMU2	EnsemblPlants:CDY38926	ProteinID:CDY38926
ProteinID:CDY38926.1	ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00066965001	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00465	ScanProsite:PS00086
PANTHER:PTHR24286	PANTHER:PTHR24286:SF11	SUPFAM:SSF48264	SignalP:SignalP-noTM	UniParc:UPI0004EE6548	:

Description

BnaA04g13470DBnaA04g13470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMU2]

Coordinates

chrLK032435:+:65150..67490

Molecular Weight (calculated)

57436.9 Da

IEP (calculated)

9.223

GRAVY (calculated)

-0.198

Length

497 amino acids

Sequence
(BLAST)

001: MSFMWNVEIL IIALVVVRIS QWLYRWSNPN VRCNGKLPPG SMGFPIIGET IEFFKPCELL EIPSFFQNRM QRYGSLFRSN IMGSKTVIST DSDVIFEIFR
101: QENQSFELSY PDVFVRVFGK DNLFFQTGNI HKHIKKSTMQ LIGSEGLKRK MIQSMNQATR EQLKWKANEG TFDLRDAVSS LIASYLTPKL ISNLKPETQA
201: ELIDHFKAFN IDWFRSPFAP STWKIIYKVL KARREAMQLI KEALKKRKES REKHGDFLDT LLEDMEKEDS IYDEASVINL LLVIGVVSKD TTSVATALMV
301: NLLSKNPEVL VELKREHGAI LQKRKDKEAE LSWEEYKYNM TFTNMVINES LRLSNLGSIL FRKALKDVEI KGELVDIQFP QDGSWPLHHL WFTITLKYMR
401: IRWSSIHGDG RFVWQGKDLR SVTKTLMVFG GGTRQCVGAD FARLQMTVFL HHLVTTYDFL VVQECEMTRT PLPCFTKDLL INISPTFPSE PCSSKSS

Best Arabidopsis Sequence Match ( AT1G78490.1 )
(BLAST)

001: MSSIWNVAML MVALVVVRIS HWLYRWSNPK CPGKLPPGSM GFPIIGETLD FFKPCGVEGI PTFVKKRMIR YGPLFRTNIF GSKTVVSTDP DVIHQIFRQE
101: NTSFELGYPD IFVKVFGKDN LFLKEVFIHK YLQKITMQIL GSEGLKQTML GNMDKATRDH IRSIASQGSF NVRKEVENLV VAYMTPKLIS NLKPETQSKL
201: IDNLNAFNLD WFKSFLRLST WKAVTKALKS REEAIQVMKD VLMMRKETRE KQEDFLNTLL EELEKDGSFF DQGSAINLIF LLAFALREGT SSCTALAVKF
301: ISKDPKVLAE LKREHKAIVD NRKDKEAGVS WEEYRHNMTF TNMVSNEVLR LANTTPLLFR KAVQDVEIKG YTIPAGWIVA VAPSAVHFDP AIYENPFEFN
401: PWRWEGKEMI WGSKTFMAFG YGVRLCVGAE FSRLQMAIFL HHLVAYYDFS MVQDSEIIRS PFHQYTKDLL INISQSPTK

Arabidopsis Description

CYP708A3CYP708A3 [Source:UniProtKB/TrEMBL;Acc:A0A178WMR8]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.