Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G13730.1 | CDY04092 | AT2G01570.1 | 21798944 |
| AT3G13730.1 | CDY17662 | AT2G01570.1 | 21798944 |
| AT3G13730.1 | CDY36236 | AT2G01570.1 | 21798944 |
| AT3G13730.1 | CDY64837 | AT2G01570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51737 | Canola | endoplasmic reticulum, golgi | 98.17 | 98.17 |
| AT3G13730.1 | Thale cress | extracellular, golgi | 88.62 | 88.8 |
| CDX97511 | Canola | extracellular, golgi | 88.62 | 88.8 |
| CDY23635 | Canola | endoplasmic reticulum, golgi | 57.72 | 82.8 |
| KRH47133 | Soybean | extracellular, golgi | 60.98 | 63.42 |
| VIT_09s0002g02080.t01 | Wine grape | endoplasmic reticulum | 61.18 | 63.37 |
| GSMUA_Achr9P28740_001 | Banana | cytosol | 30.69 | 63.18 |
| KRH44159 | Soybean | golgi | 60.57 | 62.87 |
| Solyc03g121510.2.1 | Tomato | endoplasmic reticulum, golgi | 58.54 | 61.94 |
| Os05t0200400-01 | Rice | endoplasmic reticulum, mitochondrion, plastid | 33.33 | 58.16 |
| GSMUA_Achr7P09630_001 | Banana | endoplasmic reticulum, golgi | 55.89 | 57.89 |
| GSMUA_Achr2P16740_001 | Banana | endoplasmic reticulum, golgi, plastid | 52.85 | 57.4 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 51.63 | 56.44 |
| TraesCS3D01G106100.1 | Wheat | plastid | 55.89 | 56.24 |
| TraesCS3B01G121200.1 | Wheat | plastid | 56.3 | 56.07 |
| TraesCS3A01G103800.1 | Wheat | plastid | 55.28 | 55.85 |
| HORVU3Hr1G018860.5 | Barley | endoplasmic reticulum | 56.1 | 55.65 |
| Os01t0197100-01 | Rice | endoplasmic reticulum | 54.67 | 54.9 |
| EES02301 | Sorghum | endoplasmic reticulum, golgi, plastid | 56.5 | 54.62 |
| Zm00001d039453_P001 | Maize | plastid | 54.67 | 53.37 |
| EES17857 | Sorghum | plastid | 53.66 | 50.29 |
| Zm00001d037745_P001 | Maize | plasma membrane, plastid | 52.44 | 49.43 |
| CDY59695 | Canola | golgi | 48.98 | 47.72 |
| CDX75570 | Canola | cytosol, golgi, plastid | 49.19 | 45.92 |
| CDY64922 | Canola | plasma membrane | 48.78 | 44.28 |
| CDY04961 | Canola | cytosol | 19.31 | 41.85 |
| CDX69220 | Canola | golgi, peroxisome, plastid | 36.79 | 41.61 |
| CDY26518 | Canola | mitochondrion | 22.36 | 38.33 |
| CDX98856 | Canola | endoplasmic reticulum, golgi | 36.99 | 37.92 |
| CDX70137 | Canola | endoplasmic reticulum, golgi | 36.79 | 37.71 |
| CDY14104 | Canola | endoplasmic reticulum | 36.18 | 37.4 |
| CDY11332 | Canola | endoplasmic reticulum, golgi | 35.98 | 36.95 |
| CDX80969 | Canola | endoplasmic reticulum | 33.33 | 35.57 |
| CDY49400 | Canola | endoplasmic reticulum, golgi | 35.16 | 35.02 |
| CDX77934 | Canola | endoplasmic reticulum, golgi | 34.96 | 34.75 |
| CDX99676 | Canola | cytosol | 16.06 | 34.2 |
| CDY24488 | Canola | endoplasmic reticulum, golgi | 34.35 | 34.14 |
| CDX72982 | Canola | endoplasmic reticulum, golgi | 32.11 | 32.64 |
| CDX96469 | Canola | endoplasmic reticulum, golgi | 31.91 | 32.44 |
| CDX91063 | Canola | cytosol | 28.66 | 32.41 |
| CDX85598 | Canola | cytosol | 28.46 | 32.33 |
| CDX69583 | Canola | cytosol | 28.46 | 32.18 |
| CDX86355 | Canola | golgi | 29.47 | 31.18 |
| CDX99675 | Canola | endoplasmic reticulum | 29.47 | 31.18 |
| CDY09852 | Canola | endoplasmic reticulum, extracellular | 30.08 | 31.16 |
| CDY00084 | Canola | endoplasmic reticulum, golgi | 29.27 | 30.97 |
| CDY19979 | Canola | endoplasmic reticulum, golgi | 29.07 | 30.75 |
| CDY35786 | Canola | endoplasmic reticulum, golgi | 28.25 | 30.09 |
| CDY66116 | Canola | endoplasmic reticulum, golgi | 28.25 | 30.09 |
| CDY26591 | Canola | extracellular, golgi, plasma membrane | 27.44 | 29.35 |
| CDY16028 | Canola | extracellular, golgi | 28.05 | 29.18 |
| CDX89542 | Canola | endoplasmic reticulum, extracellular | 4.88 | 28.92 |
| CDY60267 | Canola | extracellular, golgi | 27.64 | 28.75 |
| CDY66605 | Canola | endoplasmic reticulum, extracellular | 27.44 | 28.48 |
| CDX85284 | Canola | endoplasmic reticulum, golgi | 20.93 | 27.84 |
| CDY16450 | Canola | extracellular, vacuole | 25.81 | 27.79 |
| CDY15962 | Canola | endoplasmic reticulum, plasma membrane | 24.59 | 26.02 |
| CDX80949 | Canola | extracellular, golgi, plasma membrane | 26.22 | 25.05 |
| CDY49434 | Canola | golgi, vacuole | 23.98 | 24.84 |
| CDX76894 | Canola | extracellular, golgi, vacuole | 23.98 | 24.84 |
| CDY38927 | Canola | endoplasmic reticulum, extracellular | 23.98 | 24.48 |
| CDX89543 | Canola | cytosol | 15.85 | 24.0 |
| CDY38926 | Canola | endoplasmic reticulum | 24.19 | 23.94 |
| CDY04940 | Canola | endoplasmic reticulum, extracellular | 11.79 | 21.56 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:11.3.1.4 | GO:A0A078HGM5 | UniProt:A0A078HGM5 | EnsemblPlants:CDY37485 | ProteinID:CDY37485 |
| ProteinID:CDY37485.1 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0020037 |
| GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00064081001 | InterPro:IPR036396 | PFAM:PF00067 | PRINTS:PR00463 |
| ScanProsite:PS00086 | PANTHER:PTHR24286 | PANTHER:PTHR24286:SF30 | SUPFAM:SSF48264 | TMHMM:TMhelix | UniParc:UPI0004EC027B |
| SEG:seg | : | : | : | : | : |
Description
BnaC01g37470DBnaC01g37470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGM5]
Coordinates
chrLK032401:-:171987..174781
Molecular Weight (calculated)
56225.0 Da
IEP (calculated)
9.765
GRAVY (calculated)
-0.090
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTCSLLFLF SFLLFAIIIV IIFNKINGLR SSLASKKKII DHVNTNSHGP VFPQGSLGWP VIGETIEFIS SAYSDHPESF MDKRRLMYGK VFKSHIFGTA
101: TIVSTDAEVN KIVLQSDPTA FVPFYPKTVR ELMGKSSILL INGSLHRRFH GLVGSFLKSP LLKAQVVKDM HKYLSESMDQ WSEDQPVLLQ DISKTVAFKV
201: LAKALISVEK GEELDELKKE FEQFIKGLMS LPVNFPGTQL HRSLQAKKKM VKQVEKIIDG KVRRAKNKEE DDVIAKDVVD VLLKVSSENL THNLIANNMV
301: DMMIPGHDSV PVLITLAVKF LSDSPSALHF LTEENMELKR LKELTGEPLY WNDYLSLPFT QKVITETLRM GNVIIGVMRK AMKDVEVKGY VIPKGWCFLA
401: YLRSVHLDKL YYESPYKFNP WRWQERDMST SSFSPFGGGQ RLCPGLDLAR LEASIFLHHL VTRFRWTTEE DTIINFPTVH MKNKLPIWIK RR
101: TIVSTDAEVN KIVLQSDPTA FVPFYPKTVR ELMGKSSILL INGSLHRRFH GLVGSFLKSP LLKAQVVKDM HKYLSESMDQ WSEDQPVLLQ DISKTVAFKV
201: LAKALISVEK GEELDELKKE FEQFIKGLMS LPVNFPGTQL HRSLQAKKKM VKQVEKIIDG KVRRAKNKEE DDVIAKDVVD VLLKVSSENL THNLIANNMV
301: DMMIPGHDSV PVLITLAVKF LSDSPSALHF LTEENMELKR LKELTGEPLY WNDYLSLPFT QKVITETLRM GNVIIGVMRK AMKDVEVKGY VIPKGWCFLA
401: YLRSVHLDKL YYESPYKFNP WRWQERDMST SSFSPFGGGQ RLCPGLDLAR LEASIFLHHL VTRFRWTTEE DTIINFPTVH MKNKLPIWIK RR
001: MDTSSSLLFF SFFFFIIIVI FNKINGLRSS PASKKKLNDH HVTSQSHGPK FPHGSLGWPV IGETIEFVSS AYSDRPESFM DKRRLMYGRV FKSHIFGTAT
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I
Arabidopsis Description
CYP90D1CYP90D1 [Source:UniProtKB/TrEMBL;Acc:A0A178VDZ8]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.