Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G13730.1 | KRH42544 | AT2G01570.1 | 21798944 |
| AT3G13730.1 | KRH58636 | AT2G01570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47133 | Soybean | extracellular, golgi | 95.57 | 95.77 |
| VIT_09s0002g02080.t01 | Wine grape | endoplasmic reticulum | 75.32 | 75.16 |
| GSMUA_Achr9P28740_001 | Banana | cytosol | 36.08 | 71.55 |
| Solyc03g121510.2.1 | Tomato | endoplasmic reticulum, golgi | 65.82 | 67.1 |
| GSMUA_Achr2P16740_001 | Banana | endoplasmic reticulum, golgi, plastid | 63.92 | 66.89 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 62.24 | 65.56 |
| GSMUA_Achr7P09630_001 | Banana | endoplasmic reticulum, golgi | 65.19 | 65.05 |
| AT3G13730.1 | Thale cress | extracellular, golgi | 63.92 | 61.71 |
| Os05t0200400-01 | Rice | endoplasmic reticulum, mitochondrion, plastid | 36.71 | 61.7 |
| CDX97511 | Canola | extracellular, golgi | 63.5 | 61.3 |
| Bra027405.1-P | Field mustard | endoplasmic reticulum, golgi | 60.97 | 60.97 |
| Bra021505.1-P | Field mustard | endoplasmic reticulum, golgi | 62.87 | 60.57 |
| CDY37485 | Canola | extracellular, golgi | 62.87 | 60.57 |
| CDY51737 | Canola | endoplasmic reticulum, golgi | 62.87 | 60.57 |
| TraesCS3D01G106100.1 | Wheat | plastid | 62.03 | 60.12 |
| Zm00001d039453_P001 | Maize | plastid | 63.71 | 59.92 |
| TraesCS3B01G121200.1 | Wheat | plastid | 62.24 | 59.72 |
| TraesCS3A01G103800.1 | Wheat | plastid | 60.97 | 59.34 |
| EES02301 | Sorghum | endoplasmic reticulum, golgi, plastid | 63.5 | 59.14 |
| HORVU3Hr1G018860.5 | Barley | endoplasmic reticulum | 61.81 | 59.07 |
| Os01t0197100-01 | Rice | endoplasmic reticulum | 60.55 | 58.57 |
| CDY23635 | Canola | endoplasmic reticulum, golgi | 40.51 | 55.98 |
| Zm00001d037745_P001 | Maize | plasma membrane, plastid | 58.23 | 52.87 |
| EES17857 | Sorghum | plastid | 58.44 | 52.76 |
| KRH69829 | Soybean | extracellular, golgi | 50.84 | 49.59 |
| KRH28742 | Soybean | endoplasmic reticulum, extracellular | 50.21 | 48.28 |
| KRH76714 | Soybean | endoplasmic reticulum, extracellular | 43.67 | 45.0 |
| KRH14956 | Soybean | endoplasmic reticulum, golgi | 39.45 | 39.12 |
| KRH31131 | Soybean | endoplasmic reticulum, golgi | 38.82 | 38.98 |
| KRH73185 | Soybean | endoplasmic reticulum, golgi | 39.03 | 38.62 |
| KRG97749 | Soybean | endoplasmic reticulum, golgi | 37.76 | 37.76 |
| KRH01364 | Soybean | endoplasmic reticulum, golgi | 32.91 | 33.62 |
| KRG93691 | Soybean | endoplasmic reticulum, golgi | 32.91 | 33.55 |
| KRH18341 | Soybean | endoplasmic reticulum, golgi | 32.91 | 33.48 |
| KRH07099 | Soybean | endoplasmic reticulum, golgi | 33.12 | 33.26 |
| KRH09326 | Soybean | endoplasmic reticulum, golgi | 33.97 | 33.2 |
| KRH38830 | Soybean | endoplasmic reticulum, golgi | 33.54 | 32.65 |
| KRH45089 | Soybean | endoplasmic reticulum, golgi | 31.86 | 32.54 |
| KRH28664 | Soybean | endoplasmic reticulum, extracellular | 33.33 | 32.31 |
| KRH76802 | Soybean | extracellular, golgi | 33.12 | 32.04 |
| KRH70958 | Soybean | endoplasmic reticulum | 31.22 | 31.9 |
| KRH69930 | Soybean | extracellular, golgi | 31.86 | 30.51 |
| KRH27969 | Soybean | endoplasmic reticulum, vacuole | 28.9 | 28.72 |
| KRH77492 | Soybean | endoplasmic reticulum, vacuole | 29.11 | 28.63 |
Protein Annotations
| Gene3D:1.10.630.10 | EntrezGene:100782687 | MapMan:11.3.1.4 | UniProt:A0A0R0IYQ0 | EMBL:ACUP02004908 | InterPro:Cyt_P450 |
| InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | EnsemblPlantsGene:GLYMA_08G193900 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0020037 | GO:GO:0046872 |
| GO:GO:0055114 | InterPro:IPR036396 | EnsemblPlants:KRH44159 | ProteinID:KRH44159 | ProteinID:KRH44159.1 | PFAM:PF00067 |
| PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24286 | PANTHER:PTHR24286:SF30 | SUPFAM:SSF48264 | TMHMM:TMhelix |
| UniParc:UPI000189D640 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:15619946..15624754
Molecular Weight (calculated)
54381.0 Da
IEP (calculated)
9.903
GRAVY (calculated)
-0.129
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNIWIVFVT VFLLCTVILY RNRLSLMLKS KRKKNKLPLG TLGWPFIGET IEFVSCAYSD RPESFMDKRR RMYGKVFKSH IFGSPTIVST DASVNKFILQ
101: SDAKVFVPSY PKSLTELMGE SSILLINGSL QRRIHGLIGA FFKSQQLKAQ ITRDMQKYVK ESMASWREDC PIYIQDETKK IAFHVLVKAL ISLDPGEEME
201: LLKKHFQEFI SGLMSLPIKL PGTKLYQSLQ AKKKMVKLVK RIILAKRSSG FCKVPKDVVD VLLSDANEKL TDDLIADNII DMMIPGEDSV PLLMTLATKY
301: LSECPAALQQ LTEENMKLKK IQDQVGESLS WSDYLSLPFT QTVITETLRM GNIIIGVMRK ALKDVEIKGH LIPKGWCVFV NFRSVHLDDK NYECPYQFNP
401: WRWQDKDTSS CNFTPFGGGQ RLCPGLDLAR LEASIFLHHF VTQFRWHAEK DAIVNFPTVR MKKRMPVKVR RVES
101: SDAKVFVPSY PKSLTELMGE SSILLINGSL QRRIHGLIGA FFKSQQLKAQ ITRDMQKYVK ESMASWREDC PIYIQDETKK IAFHVLVKAL ISLDPGEEME
201: LLKKHFQEFI SGLMSLPIKL PGTKLYQSLQ AKKKMVKLVK RIILAKRSSG FCKVPKDVVD VLLSDANEKL TDDLIADNII DMMIPGEDSV PLLMTLATKY
301: LSECPAALQQ LTEENMKLKK IQDQVGESLS WSDYLSLPFT QTVITETLRM GNIIIGVMRK ALKDVEIKGH LIPKGWCVFV NFRSVHLDDK NYECPYQFNP
401: WRWQDKDTSS CNFTPFGGGQ RLCPGLDLAR LEASIFLHHF VTQFRWHAEK DAIVNFPTVR MKKRMPVKVR RVES
001: MDTSSSLLFF SFFFFIIIVI FNKINGLRSS PASKKKLNDH HVTSQSHGPK FPHGSLGWPV IGETIEFVSS AYSDRPESFM DKRRLMYGRV FKSHIFGTAT
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I
Arabidopsis Description
CYP90D1CYP90D1 [Source:UniProtKB/TrEMBL;Acc:A0A178VDZ8]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.