Factsheet for GSMUA_Achr9P28740_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr1P21300_001
GSMUA_Achr8P18250_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13730.1	GSMUA_Achr10P...	AT2G01570.1	21798944
AT3G13730.1	GSMUA_Achr1P21300_001	AT2G01570.1	21798944
AT3G13730.1	GSMUA_Achr8P18250_001	AT2G01570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0200400-01	Rice	endoplasmic reticulum, mitochondrion, plastid	72.8	61.7
GSMUA_Achr10P...	Banana	endoplasmic reticulum	84.52	44.89
GSMUA_Achr7P09630_001	Banana	endoplasmic reticulum, golgi	87.45	44.0
GSMUA_Achr2P16740_001	Banana	endoplasmic reticulum, golgi, plastid	83.26	43.93
Os01t0197100-01	Rice	endoplasmic reticulum	78.66	38.37
TraesCS3D01G106100.1	Wheat	plastid	76.99	37.63
TraesCS3B01G121200.1	Wheat	plastid	76.99	37.25
TraesCS3A01G103800.1	Wheat	plastid	75.73	37.17
EES02301	Sorghum	endoplasmic reticulum, golgi, plastid	78.66	36.94
KRH47133	Soybean	extracellular, golgi	72.8	36.79
Zm00001d039453_P001	Maize	plastid	77.41	36.71
VIT_09s0002g02080.t01	Wine grape	endoplasmic reticulum	72.8	36.63
HORVU3Hr1G018860.5	Barley	endoplasmic reticulum	75.73	36.49
KRH44159	Soybean	golgi	71.55	36.08
EES17857	Sorghum	plastid	71.97	32.76
Zm00001d037745_P001	Maize	plasma membrane, plastid	71.55	32.76
Solyc03g121510.2.1	Tomato	endoplasmic reticulum, golgi	61.92	31.83
CDX97511	Canola	extracellular, golgi	65.27	31.77
AT3G13730.1	Thale cress	extracellular, golgi	64.02	31.16
Bra021505.1-P	Field mustard	endoplasmic reticulum, golgi	63.18	30.69
CDY37485	Canola	extracellular, golgi	63.18	30.69
CDY51737	Canola	endoplasmic reticulum, golgi	63.18	30.69
Bra027405.1-P	Field mustard	endoplasmic reticulum, golgi	58.16	29.32
GSMUA_Achr8P00150_001	Banana	endoplasmic reticulum, golgi	41.0	20.37
GSMUA_Achr5P10500_001	Banana	endoplasmic reticulum, vacuole	34.73	20.19
GSMUA_Achr3P08890_001	Banana	endoplasmic reticulum, vacuole	40.59	19.8
GSMUA_Achr8P28130_001	Banana	cytosol	35.15	19.58
GSMUA_Achr4P10750_001	Banana	endoplasmic reticulum, plasma membrane	37.66	18.52
GSMUA_Achr6P00040_001	Banana	endoplasmic reticulum	35.15	18.06
GSMUA_Achr2P13610_001	Banana	endoplasmic reticulum, golgi	34.73	17.85
GSMUA_Achr5P04260_001	Banana	endoplasmic reticulum, plasma membrane	35.15	17.72
GSMUA_Achr4P32900_001	Banana	endoplasmic reticulum	34.31	17.3
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	34.31	16.98
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	36.82	16.89
GSMUA_Achr8P26350_001	Banana	endoplasmic reticulum, extracellular	35.15	16.63
GSMUA_Achr8P26330_001	Banana	endoplasmic reticulum, extracellular	34.73	16.31
GSMUA_Achr5P10490_001	Banana	plasma membrane, vacuole	33.05	16.29
GSMUA_Achr4P09180_001	Banana	endoplasmic reticulum, golgi	32.22	15.71
CDY23635	Canola	endoplasmic reticulum, golgi	18.83	13.12

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr9G28740_001
EnsemblPlants:GSMUA_Achr9P28740_001	EnsemblPlants:GSMUA_Achr9T28740_001	InterPro:IPR036396	UniProt:M0U4D1	PFAM:PF00067	ScanProsite:PS00086
PANTHER:PTHR24286	PANTHER:PTHR24286:SF98	SUPFAM:SSF48264	UniParc:UPI000296AD15	SEG:seg	:

Description

Cytochrome P450 90D2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G28740_001]

Coordinates

chr9:+:32622475..32624355

Molecular Weight (calculated)

27724.7 Da

IEP (calculated)

6.670

GRAVY (calculated)

-0.236

Length

239 amino acids

Sequence
(BLAST)

001: MVMLIKSIIL EKRKNNCGRT PLDVVDVLIN DASDQLTDDL ISDNMIDLMI PAEDSVPVLV TLAVKYLSEC PLALQQLEEE NMQLKKRRSL PGEDLQWTDY
101: MSLSFTQDVI TETLRLGNII SGIMRKAVRD VEIKGHFIPK GWCVFAYFRS VHLDENHYEE AYKFNPWRWK DKDMSTCSFT PFGGGQRLCP GLDLSRLEAS
201: IFLHHLVTNF TWVAEEDQIV NFPTVRMKRR MPIRVRRKT

Best Arabidopsis Sequence Match ( AT3G13730.1 )
(BLAST)

001: MDTSSSLLFF SFFFFIIIVI FNKINGLRSS PASKKKLNDH HVTSQSHGPK FPHGSLGWPV IGETIEFVSS AYSDRPESFM DKRRLMYGRV FKSHIFGTAT
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I

Arabidopsis Description

CYP90D1CYP90D1 [Source:UniProtKB/TrEMBL;Acc:A0A178VDZ8]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.