Factsheet for Bra027405.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra017443.1-P
Bra024875.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13730.1	Bra017443.1-P	AT2G01570.1	21798944
AT3G13730.1	Bra024875.1-P	AT2G01570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97511	Canola	extracellular, golgi	97.89	94.5
AT3G13730.1	Thale cress	extracellular, golgi	87.76	84.73
Bra021505.1-P	Field mustard	endoplasmic reticulum, golgi	86.5	83.33
KRH47133	Soybean	extracellular, golgi	60.97	61.1
KRH44159	Soybean	golgi	60.97	60.97
VIT_09s0002g02080.t01	Wine grape	endoplasmic reticulum	60.55	60.42
Solyc03g121510.2.1	Tomato	endoplasmic reticulum, golgi	57.17	58.28
GSMUA_Achr9P28740_001	Banana	cytosol	29.32	58.16
Os05t0200400-01	Rice	endoplasmic reticulum, mitochondrion, plastid	33.33	56.03
GSMUA_Achr7P09630_001	Banana	endoplasmic reticulum, golgi	55.49	55.37
GSMUA_Achr10P...	Banana	endoplasmic reticulum	51.9	54.67
GSMUA_Achr2P16740_001	Banana	endoplasmic reticulum, golgi, plastid	51.48	53.86
HORVU3Hr1G018860.5	Barley	endoplasmic reticulum	55.91	53.43
TraesCS3D01G106100.1	Wheat	plastid	55.06	53.37
TraesCS3B01G121200.1	Wheat	plastid	55.49	53.24
Os01t0197100-01	Rice	endoplasmic reticulum	54.64	52.86
TraesCS3A01G103800.1	Wheat	plastid	54.01	52.57
EES02301	Sorghum	endoplasmic reticulum, golgi, plastid	55.91	52.06
Zm00001d039453_P001	Maize	plastid	54.43	51.19
EES17857	Sorghum	plastid	54.01	48.76
Zm00001d037745_P001	Maize	plasma membrane, plastid	52.11	47.32
Bra011678.1-P	Field mustard	extracellular, golgi	47.05	43.39
Bra017757.1-P	Field mustard	plasma membrane	38.4	37.92
Bra028751.1-P	Field mustard	endoplasmic reticulum, golgi	29.54	37.04
Bra009126.1-P	Field mustard	endoplasmic reticulum	33.97	35.7
Bra005863.1-P	Field mustard	endoplasmic reticulum, golgi	35.02	34.66
Bra030023.1-P	Field mustard	cytosol	30.8	32.81
Bra036097.1-P	Field mustard	endoplasmic reticulum, golgi	33.76	31.62
Bra025409.1-P	Field mustard	golgi	30.8	31.4
Bra015998.1-P	Field mustard	endoplasmic reticulum, golgi	31.43	30.85
Bra025427.1-P	Field mustard	endoplasmic reticulum	30.17	30.75
Bra023464.1-P	Field mustard	cytosol	27.64	30.32
Bra036203.1-P	Field mustard	endoplasmic reticulum, golgi	29.54	30.11
Bra008760.1-P	Field mustard	cytosol	27.43	29.89
Bra020747.1-P	Field mustard	endoplasmic reticulum, golgi	28.9	29.65
Bra019782.1-P	Field mustard	endoplasmic reticulum, extracellular	28.06	27.94
Bra026956.1-P	Field mustard	extracellular, golgi	19.41	27.63
Bra014144.1-P	Field mustard	extracellular, vacuole	25.32	26.26
Bra005843.1-P	Field mustard	endoplasmic reticulum, golgi	27.43	25.59
Bra028769.1-P	Field mustard	cytosol	21.73	25.12
Bra032184.1-P	Field mustard	extracellular, golgi	21.52	23.94
Bra032183.1-P	Field mustard	endoplasmic reticulum, extracellular	24.26	23.86
Bra039931.1-P	Field mustard	golgi, vacuole	21.73	22.89

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.3.1.4	EnsemblPlantsGene:Bra027405	EnsemblPlants:Bra027405.1	EnsemblPlants:Bra027405.1-P	InterPro:Cyt_P450
InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016705
GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	UniProt:M4EF43	PFAM:PF00067
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF30	SUPFAM:SSF48264	TMHMM:TMhelix
UniParc:UPI0002547F91	SEG:seg	:	:	:	:

Description

AT3G13730 (E=8e-215) CYP90D1 | CYP90D1; oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen / oxygen binding

Coordinates

chrA05:+:20740411..20744016

Molecular Weight (calculated)

53978.9 Da

IEP (calculated)

9.529

GRAVY (calculated)

-0.141

Length

474 amino acids

Sequence
(BLAST)

001: MDISSSLLLL SFFLFVIIIF IFNKINGLRT SSVSKKKLTD HVSTHSYGPR FPQGSLGWPI LGETIEFVSS AYSDYPESFM DKRQLMYGRV FKSHIFGTAT
101: IVSTDAEVNK AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPP LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKNVAFKVL
201: AKALISVEKG EELEELKEEF EQFIRGLMSL PINLPGTQLH RSLQAKKKMV KQVEKIIGDK VRRAKNKEED GAVAKDVVDV LLKDSSEKLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPTALHFL TEENMELKSL KEMTGEQLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLH YDSPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL EASIFLHHLV TRFRLEPLSR PERN

Best Arabidopsis Sequence Match ( AT3G13730.2 )
(BLAST)

001: MDTSSSLLFF SFFFFIIIVI FNKINGLRSS PASKKKLNDH HVTSQSHGPK FPHGSLGWPV IGETIEFVSS AYSDRPESFM DKRRLMYGRV FKSHIFGTAT
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFR

Arabidopsis Description

CYP90D1CYP90D1 [Source:UniProtKB/TrEMBL;Acc:A0A178VDZ8]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.