Factsheet for Bra030023.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49400	Canola	endoplasmic reticulum, golgi	96.4	86.84
Bra036097.1-P	Field mustard	endoplasmic reticulum, golgi	94.16	82.81
AT3G50660.1	Thale cress	endoplasmic reticulum	93.48	81.09
VIT_04s0023g01630.t01	Wine grape	endoplasmic reticulum	63.6	69.36
KRH76802	Soybean	extracellular, golgi	74.38	67.55
KRH28664	Soybean	endoplasmic reticulum, extracellular	73.48	66.87
Solyc02g085360.2.1	Tomato	endoplasmic reticulum	71.46	64.77
PGSC0003DMT400038580	Potato	endoplasmic reticulum, golgi	71.46	64.77
GSMUA_Achr4P10750_001	Banana	endoplasmic reticulum, plasma membrane	67.42	61.73
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	66.97	61.7
Os03t0227700-01	Rice	endoplasmic reticulum, golgi	69.66	61.26
HORVU4Hr1G065440.16	Barley	endoplasmic reticulum	69.21	60.75
TraesCS4D01G235200.1	Wheat	endoplasmic reticulum, golgi	68.76	60.59
TraesCS4B01G234100.1	Wheat	endoplasmic reticulum, golgi	68.76	60.47
TraesCS3D01G526300.1	Wheat	endoplasmic reticulum, plasma membrane	67.64	60.44
EER92600	Sorghum	endoplasmic reticulum	67.87	59.8
Zm00001d028325_P005	Maize	endoplasmic reticulum	68.09	59.65
TraesCS3A01G519000.2	Wheat	endoplasmic reticulum	66.97	59.6
TraesCS3B01G586500.1	Wheat	endoplasmic reticulum, plasma membrane	66.74	59.52
KRH69930	Soybean	extracellular, golgi	65.39	58.79
TraesCS3D01G526400.1	Wheat	endoplasmic reticulum, golgi	53.26	55.5
TraesCS4A01G078000.1	Wheat	endoplasmic reticulum, golgi	68.99	54.63
Bra008760.1-P	Field mustard	cytosol	35.73	36.55
Bra009126.1-P	Field mustard	endoplasmic reticulum	36.63	36.14
Bra023464.1-P	Field mustard	cytosol	35.06	36.11
Bra028751.1-P	Field mustard	endoplasmic reticulum, golgi	29.66	34.92
Bra005863.1-P	Field mustard	endoplasmic reticulum, golgi	37.53	34.86
Bra019782.1-P	Field mustard	endoplasmic reticulum, extracellular	35.28	32.98
Bra021505.1-P	Field mustard	endoplasmic reticulum, golgi	35.51	32.11
Bra025409.1-P	Field mustard	golgi	33.26	31.83
Bra015998.1-P	Field mustard	endoplasmic reticulum, golgi	34.16	31.47
Bra020747.1-P	Field mustard	endoplasmic reticulum, golgi	32.36	31.17
Bra011678.1-P	Field mustard	extracellular, golgi	35.73	30.93
Bra027405.1-P	Field mustard	endoplasmic reticulum, golgi	32.81	30.8
Bra036203.1-P	Field mustard	endoplasmic reticulum, golgi	31.91	30.54
Bra025427.1-P	Field mustard	endoplasmic reticulum	31.46	30.11
Bra026956.1-P	Field mustard	extracellular, golgi	21.12	28.23
Bra028769.1-P	Field mustard	cytosol	25.84	28.05
Bra017757.1-P	Field mustard	plasma membrane	28.31	26.25
Bra014144.1-P	Field mustard	extracellular, vacuole	26.07	25.38
Bra032183.1-P	Field mustard	endoplasmic reticulum, extracellular	27.19	25.1
Bra005843.1-P	Field mustard	endoplasmic reticulum, golgi	28.54	25.0
Bra039931.1-P	Field mustard	golgi, vacuole	24.49	24.22
Bra032184.1-P	Field mustard	extracellular, golgi	20.9	21.83

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.3.1.1	EnsemblPlantsGene:Bra030023	EnsemblPlants:Bra030023.1	EnsemblPlants:Bra030023.1-P	ncoils:Coil
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	UniProt:M4EMK3
PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF37
SUPFAM:SSF48264	UniParc:UPI00025446F2	SEG:seg	:	:	:

Description

AT3G50660 (E=1e-223) DWF4, CYP90B1, CLM, SNP2, SAV1 | DWF4 (DWARF 4); steroid 22-alpha hydroxylase

Coordinates

chrA01:-:15863946..15866996

Molecular Weight (calculated)

50842.9 Da

IEP (calculated)

6.617

GRAVY (calculated)

-0.353

Length

445 amino acids

Sequence
(BLAST)

001: MQQHISKHGK IYRSNLFGEP TIVSADAGLN RFILQNEGRL FECSYPRSIG GILGKWSMLV LVGDMHRDMR SISLNFLSHA RLKTILLKDV ERHTLFVLDS
101: WQQQTVFSAQ DEAKKFTFNL MAKHIMSMDP GEEETEQLKK EYVTFMKGVV SAPLNLPGTA YRKALQSRAT ILKFIERKME ERKSEIKEEG EAEDEAEISQ
201: SDHHYERKHR TDDDLLGWVL KHSNLSTEQI LDLILSLLFA GHETSSVAIA LAIYFLQACP KAVQELREEH LEIAMGKKEL GESELNWDDY KKMDFTQCVI
301: NETLRLGNVV RFLHRKALKD VRYKGYDIPS GWKVLPVISA VHLDNSRYDE PNLFNPWRWQ QQNNGACGSS SSGSGSFSTW GNNFMPFGGG PRLCAGSELA
401: KLEMAVFIHH LVLNFNWELA EDDQPFAFPF VDFPNGLPIR VSRIL

Best Arabidopsis Sequence Match ( AT3G50660.1 )
(BLAST)

001: MFETEHHTLL PLLLLPSLLS LLLFLILLKR RNRKTRFNLP PGKSGWPFLG ETIGYLKPYT ATTLGDFMQQ HVSKYGKIYR SNLFGEPTIV SADAGLNRFI
101: LQNEGRLFEC SYPRSIGGIL GKWSMLVLVG DMHRDMRSIS LNFLSHARLR TILLKDVERH TLFVLDSWQQ NSIFSAQDEA KKFTFNLMAK HIMSMDPGEE
201: ETEQLKKEYV TFMKGVVSAP LNLPGTAYHK ALQSRATILK FIERKMEERK LDIKEEDQEE EEVKTEDEAE MSKSDHVRKQ RTDDDLLGWV LKHSNLSTEQ
301: ILDLILSLLF AGHETSSVAI ALAIFFLQAC PKAVEELREE HLEIARAKKE LGESELNWDD YKKMDFTQCV INETLRLGNV VRFLHRKALK DVRYKGYDIP
401: SGWKVLPVIS AVHLDNSRYD QPNLFNPWRW QQQNNGASSS GSGSFSTWGN NYMPFGGGPR LCAGSELAKL EMAVFIHHLV LKFNWELAED DKPFAFPFVD
501: FPNGLPIRVS RIL

Arabidopsis Description

CYP90B1Cytochrome P450 90B1 [Source:UniProtKB/Swiss-Prot;Acc:O64989]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.