Factsheet for PGSC0003DMT400038580

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g085360.2.1	Tomato	endoplasmic reticulum	97.35	97.35
VIT_04s0023g01630.t01	Wine grape	endoplasmic reticulum	64.97	78.19
KRH28664	Soybean	endoplasmic reticulum, extracellular	72.3	72.6
KRH76802	Soybean	extracellular, golgi	72.3	72.45
CDY26518	Canola	mitochondrion	41.96	71.78
CDX77934	Canola	endoplasmic reticulum, golgi	72.1	71.52
Bra030023.1-P	Field mustard	cytosol	64.77	71.46
CDY49400	Canola	endoplasmic reticulum, golgi	71.49	71.05
CDY24488	Canola	endoplasmic reticulum, golgi	71.49	70.91
Bra036097.1-P	Field mustard	endoplasmic reticulum, golgi	71.49	69.37
AT3G50660.1	Thale cress	endoplasmic reticulum	71.49	68.42
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	64.77	65.84
GSMUA_Achr4P10750_001	Banana	endoplasmic reticulum, plasma membrane	64.77	65.43
KRH69930	Soybean	extracellular, golgi	64.77	64.24
TraesCS4B01G234100.1	Wheat	endoplasmic reticulum, golgi	65.99	64.03
HORVU4Hr1G065440.16	Barley	endoplasmic reticulum	65.99	63.91
TraesCS4D01G235200.1	Wheat	endoplasmic reticulum, golgi	65.58	63.76
TraesCS3D01G526300.1	Wheat	endoplasmic reticulum, plasma membrane	64.56	63.65
TraesCS3B01G586500.1	Wheat	endoplasmic reticulum, plasma membrane	64.36	63.33
Os03t0227700-01	Rice	endoplasmic reticulum, golgi	64.97	63.04
EER92600	Sorghum	endoplasmic reticulum	64.56	62.77
TraesCS3A01G519000.2	Wheat	endoplasmic reticulum	63.75	62.6
Zm00001d028325_P005	Maize	endoplasmic reticulum	64.77	62.6
TraesCS3D01G526400.1	Wheat	endoplasmic reticulum, golgi	52.75	60.66
TraesCS4A01G078000.1	Wheat	endoplasmic reticulum, golgi	65.78	57.47
PGSC0003DMT400044731	Potato	endoplasmic reticulum, plasma membrane	41.96	42.92
PGSC0003DMT400014907	Potato	cytosol	29.53	38.46
PGSC0003DMT400061190	Potato	endoplasmic reticulum, golgi	38.29	38.37
PGSC0003DMT400007849	Potato	cytosol	18.74	37.25
PGSC0003DMT400009094	Potato	cytosol, golgi	33.81	33.6
PGSC0003DMT400003477	Potato	endoplasmic reticulum, extracellular	31.36	33.19
PGSC0003DMT400039514	Potato	endoplasmic reticulum, golgi	31.16	31.88
PGSC0003DMT400088007	Potato	cytosol	25.05	31.78
PGSC0003DMT400091776	Potato	cytosol	37.68	28.07

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102603786	MapMan:11.3.1.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-IV
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016021	GO:GO:0016132	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037
GO:GO:0046872	GO:GO:0048366	GO:GO:0055114	GO:GO:0080132	InterPro:IPR036396	UniProt:M1B747
PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400014902	PGSC:PGSC0003DMG400014902	EnsemblPlants:PGSC0003DMT400038580	PRINTS:PR00385	PRINTS:PR00465
ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF37	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI00029618B5
RefSeq:XP_006340608.1	SEG:seg	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400014902]

Coordinates

chr2:-:40576028..40581268

Molecular Weight (calculated)

55784.4 Da

IEP (calculated)

8.352

GRAVY (calculated)

-0.226

Length

491 amino acids

Sequence
(BLAST)

001: MSDLEFFLFL VPPILAVLII LNLFKRKHKF QNLPPGDMGW PFLGETIGYL RPYSVTTIGD FMQDHISRYG KIFKSNLFGE PTIVSADAGL NRYILQNEGR
101: LFECNYPRSI GGILGKWSML VQVGQMHRDM RMISLNFLSN ARLRNQLLSE VEKHTVLVLG SWKQDSVVCA QDEAKKFTFN FMAEHIMSLQ PGNPETEKLK
201: KEYITFMKGV VSAPLNFPGT AYRKALQSRS TILGFIERKM EERRNEMNGN ENDLLGWVLK NSNLSKEQIL DLLLSLLFAG HETSSVAIAL SIFFLESCPA
301: AVQQLTEEHL EISRAKKQSG ETELNWDDYK KMEFTQCVIN ETLRLGNVVR FLHRKAVKDV RYKGYDIPCG WKVLPVISAA HLDPSLFDRP HDFDPWRWQN
401: AEESPSGKGG STGTSSTTKS SNNFMPFGGG PRLCAGSELA KLEMAIFIHY LVLNFHWKLA APDQAFAYPY VDFPNALPIT IQHRSSTKLH D

Best Arabidopsis Sequence Match ( AT3G50660.1 )
(BLAST)

001: MFETEHHTLL PLLLLPSLLS LLLFLILLKR RNRKTRFNLP PGKSGWPFLG ETIGYLKPYT ATTLGDFMQQ HVSKYGKIYR SNLFGEPTIV SADAGLNRFI
101: LQNEGRLFEC SYPRSIGGIL GKWSMLVLVG DMHRDMRSIS LNFLSHARLR TILLKDVERH TLFVLDSWQQ NSIFSAQDEA KKFTFNLMAK HIMSMDPGEE
201: ETEQLKKEYV TFMKGVVSAP LNLPGTAYHK ALQSRATILK FIERKMEERK LDIKEEDQEE EEVKTEDEAE MSKSDHVRKQ RTDDDLLGWV LKHSNLSTEQ
301: ILDLILSLLF AGHETSSVAI ALAIFFLQAC PKAVEELREE HLEIARAKKE LGESELNWDD YKKMDFTQCV INETLRLGNV VRFLHRKALK DVRYKGYDIP
401: SGWKVLPVIS AVHLDNSRYD QPNLFNPWRW QQQNNGASSS GSGSFSTWGN NYMPFGGGPR LCAGSELAKL EMAVFIHHLV LKFNWELAED DKPFAFPFVD
501: FPNGLPIRVS RIL

Arabidopsis Description

CYP90B1Cytochrome P450 90B1 [Source:UniProtKB/Swiss-Prot;Acc:O64989]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.