Factsheet for PGSC0003DMT400039514

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g019870.2.1	Tomato	extracellular	97.08	97.08
KRH09326	Soybean	endoplasmic reticulum, golgi	75.42	74.64
KRH38830	Soybean	endoplasmic reticulum, golgi	75.42	74.33
VIT_16s0039g00290.t01	Wine grape	endoplasmic reticulum, golgi	73.96	73.05
Bra015998.1-P	Field mustard	endoplasmic reticulum, golgi	68.96	68.53
AT1G73340.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	69.38	68.38
CDX96469	Canola	endoplasmic reticulum, golgi	68.54	67.98
CDX72982	Canola	endoplasmic reticulum, golgi	68.12	67.56
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	64.17	59.12
PGSC0003DMT400088007	Potato	cytosol	27.29	33.85
PGSC0003DMT400044731	Potato	endoplasmic reticulum, plasma membrane	32.5	32.5
PGSC0003DMT400061190	Potato	endoplasmic reticulum, golgi	33.12	32.45
PGSC0003DMT400014907	Potato	cytosol	25.21	32.1
PGSC0003DMT400007849	Potato	cytosol	16.25	31.58
PGSC0003DMT400038580	Potato	endoplasmic reticulum, golgi	31.88	31.16
PGSC0003DMT400003477	Potato	endoplasmic reticulum, extracellular	29.79	30.82
PGSC0003DMT400009094	Potato	cytosol, golgi	30.83	29.96
PGSC0003DMT400091776	Potato	cytosol	31.25	22.76

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102604861	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-IV
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	UniProt:M1B8E4
PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400015278	PGSC:PGSC0003DMG400015278	EnsemblPlants:PGSC0003DMT400039514	PRINTS:PR00385	PRINTS:PR00465
ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF83	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI00029640D8
RefSeq:XP_006351532.1	SEG:seg	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400015278]

Coordinates

chr3:+:50239125..50242642

Molecular Weight (calculated)

55354.8 Da

IEP (calculated)

8.295

GRAVY (calculated)

-0.206

Length

480 amino acids

Sequence
(BLAST)

001: MEIYSEYCVL IIITLFSLIF IIKYYKKSKF QIGSTKKFPP GRRGWPIIGD SFNWYNAVAS SHPPCFVEQQ VQKYGKIFSC SLHGKWAVVS VDPVFNKFVM
101: QNEGKLFQSS YPKSFRDLVG KNGVITAQGE QQRKLHSIAS NMMRLDKLKF HFLNDIQRVI QETLNNFQDN EVILLQDVCR KLAINLMVNQ LLGVSSESEV
201: NEMAQLFSDF VDGCLSVPIN MPGFAYHTAM KGRENIIIKI NKIIERHRKE ASNGNGVIYR LLEEESLPDE AVADFIINLL FAGNETTAKT MAFAVYFLTQ
301: CPKAMKQLQD EQESFRNEKG SNFDNEEMLS WQDYKAMPFT QCVIDETLRL GGIAIWLMRE ATNDVVYGDY VIPKGCFVVP FLSAVHLNEN IYDEPRIFNP
401: WRWMNPENQE KRNWRGSPFF APFGGGGRFC PGAELARLQI ALFLHYFVTT YRWKQVKEDR MSFFPSARLV NGFQIQLTRS

Best Arabidopsis Sequence Match ( AT1G73340.1 )
(BLAST)

001: MAESAGESYR LLSVSSSTTF LAFIIIFLLA GIARRKRRAP HRLPPGSRGW PLIGDTFAWL NAVAGSHPSS FVEKQIKKYG RIFSCSLFGK WAVVSADPDF
101: NRFIMQNEGK LFQSSYPKSF RDLVGKDGVI TVHGDQQRRL HSIASSMMRH DQLKTHFLEV IPVVMLQTLS NFKDGEVVLL QDICRKVAIH LMVNQLLGVS
201: SESEVDEMSQ LFSDFVDGCL SVPIDLPGFT YNKAMKARKE IIRKINKTIE KRLQNKAASD TAGNGVLGRL LEEESLPNES MADFIINLLF AGNETTSKTM
301: LFAVYFLTHC PKAMTQLLEE HDRLAGGMLT WQDYKTMDFT QCVIDETLRL GGIAIWLMRE AKEDVSYQDY VIPKGCFVVP FLSAVHLDES YYKESLSFNP
401: WRWLDPETQQ KRNWRTSPFY CPFGGGTRFC PGAELARLQI ALFLHYFITT YKWTQLKEDR ISFFPSARLV NGFKIQLNRR DSDPPNQ

Arabidopsis Description

Cytochrome P450 superfamily protein [Source:TAIR;Acc:AT1G73340]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.