Factsheet for PGSC0003DMT400091776

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 1
endoplasmic reticulum 2
extracellular 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g093540.2.1	Tomato	extracellular, golgi	62.67	86.58
VIT_14s0066g00170.t01	Wine grape	cytosol	31.41	52.01
PGSC0003DMT400044731	Potato	endoplasmic reticulum, plasma membrane	34.9	47.92
CDX85598	Canola	cytosol	31.11	47.34
Bra023464.1-P	Field mustard	cytosol	30.96	47.22
Bra008760.1-P	Field mustard	cytosol	31.11	47.13
CDX69583	Canola	cytosol	31.11	47.13
KRH07099	Soybean	endoplasmic reticulum, golgi	33.69	47.03
CDX91063	Canola	cytosol	30.96	46.9
AT5G14400.2	Thale cress	cytosol	29.89	46.79
CDY09852	Canola	endoplasmic reticulum, extracellular	31.56	43.79
PGSC0003DMT400038580	Potato	endoplasmic reticulum, golgi	28.07	37.68
PGSC0003DMT400007849	Potato	cytosol	12.9	34.41
PGSC0003DMT400088007	Potato	cytosol	19.42	33.07
PGSC0003DMT400061190	Potato	endoplasmic reticulum, golgi	24.58	33.06
PGSC0003DMT400003477	Potato	endoplasmic reticulum, extracellular	22.31	31.68
PGSC0003DMT400039514	Potato	endoplasmic reticulum, golgi	22.76	31.25
PGSC0003DMT400014907	Potato	cytosol	17.45	30.5
PGSC0003DMT400009094	Potato	cytosol, golgi	20.94	27.94

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:M1DND6	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400041347	PGSC:PGSC0003DMG400041347
EnsemblPlants:PGSC0003DMT400091776	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF29
SUPFAM:SSF48264	UniParc:UPI0002951DE8	SEG:seg	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400041347]

Coordinates

chr2:-:47559101..47565794

Molecular Weight (calculated)

75491.7 Da

IEP (calculated)

9.645

GRAVY (calculated)

-0.170

Length

659 amino acids

Sequence
(BLAST)

001: MILMSVLEME PGEPLGLELL KDFLTFMKGF VSIPINLPWT HHGKAIKARR RIASTLKQIL KEKDSFNEIM LLKGKLSDVE KVSIVLDLLF AGFETTSGLL
101: SLLVYFLAKS SQALQNLKDE HRTLRRKKKK GEPLNWEDYK QMEFTMMVIN ETLRCGNLVK FVLREAIKGV DFKGYHIPAG WKILPIFSSM HLDPSLHENP
201: SEFNPWRWAD PATSKNVTPF GGGLRMCPGS ELAKLEAAFF LHHLVLNYRY GKVFKSYIFG SPTIISCDLK LNKFVLQKEG KLFQSSYPKP IRDILGKHSL
301: MIVTDVERHK KLRRIEVGLI NKFSSTSNFL GGIDKLCISL MESWRGNQLI LFSKQAKQFS FNLMLMNLLD MQPGEPLGLQ LLEDFLTFMK GFVSIPINLP
401: WTPYAKAVKA RTRISATLKQ ILNEWKNRKD VQVQNGQQKG DPFDEILVKE DLISDVEKVS ILLDLLLAGY ETTSGLLSLL VYFLAQSPQA LQTLKDEHLA
501: IRKKKKEGEP LNWEDYKQME FTTMVINETL RCGNLVKFVH REAIKDVKFK GYHIPAGWKV LPILSAVHLE PSLHENPSEF NPWRWTDPAT SHKVVPFGGG
601: SRLCPGSELG KLEASFFLHY LLLNYRWTMK EEEYPMLYPY MDFPKGLLIA LETETKNAN

Best Arabidopsis Sequence Match ( AT5G14400.2 )
(BLAST)

001: MGWPFIGETI SFFKPHRSDS IGTFLQQRVS RYGKVFKSNI CGGKAVVSCD QELNMFILQN EGKLFTSDYP KAMHDILGKY SLLLATGEIH RKLKNVIISF
101: INLTKSKPDF LHCAENLSIS ILKSWKNCRE VEFHKEVKIF TLSVMVNQLL SIKPEDPARL YVLQDFLSYM KGFISLPIPL PGTGYTNAIK ARKRLSARVM
201: GMIKEREREE EDMNNAIREE DFLDSIISNE DLNYEEKVSI VLDILLGGFE TSATTLSLVV YFLAKSPNLL HKLKEEHAAI RAKKGDGELL NWEDYQKMEF
301: TQCVISEALR CEYVIPKGWK VFPIFTAVHL DPSLHENPFE FNPMRWTDKA KMNKKTTAFG GGVRVCPGGE LGKLQIAFFL HHLVLSYRWK IKSDEMPIAH
401: PYVEFKRGML LEIEPTKFLE D

Arabidopsis Description

CYP724A1cytochrome P450, family 724, subfamily A, polypeptide 1 [Source:TAIR;Acc:AT5G14400]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.