Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97511 | Canola | extracellular, golgi | 89.61 | 89.61 |
| CDY37485 | Canola | extracellular, golgi | 88.8 | 88.62 |
| CDY51737 | Canola | endoplasmic reticulum, golgi | 88.59 | 88.41 |
| Bra021505.1-P | Field mustard | endoplasmic reticulum, golgi | 88.59 | 88.41 |
| Bra027405.1-P | Field mustard | endoplasmic reticulum, golgi | 84.73 | 87.76 |
| CDY23635 | Canola | endoplasmic reticulum, golgi | 58.66 | 83.97 |
| KRH47133 | Soybean | extracellular, golgi | 62.32 | 64.69 |
| GSMUA_Achr9P28740_001 | Banana | cytosol | 31.16 | 64.02 |
| KRH44159 | Soybean | golgi | 61.71 | 63.92 |
| VIT_09s0002g02080.t01 | Wine grape | endoplasmic reticulum | 60.9 | 62.95 |
| Solyc03g121510.2.1 | Tomato | endoplasmic reticulum, golgi | 58.66 | 61.94 |
| GSMUA_Achr7P09630_001 | Banana | endoplasmic reticulum, golgi | 56.01 | 57.89 |
| Os05t0200400-01 | Rice | endoplasmic reticulum, mitochondrion, plastid | 32.99 | 57.45 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 52.55 | 57.33 |
| GSMUA_Achr2P16740_001 | Banana | endoplasmic reticulum, golgi, plastid | 52.75 | 57.17 |
| TraesCS3B01G121200.1 | Wheat | plastid | 56.42 | 56.07 |
| TraesCS3D01G106100.1 | Wheat | plastid | 55.8 | 56.03 |
| HORVU3Hr1G018860.5 | Barley | endoplasmic reticulum | 56.42 | 55.85 |
| TraesCS3A01G103800.1 | Wheat | plastid | 54.99 | 55.44 |
| Os01t0197100-01 | Rice | endoplasmic reticulum | 54.99 | 55.1 |
| EES02301 | Sorghum | endoplasmic reticulum, golgi, plastid | 56.21 | 54.22 |
| Zm00001d039453_P001 | Maize | plastid | 54.38 | 52.98 |
| EES17857 | Sorghum | plastid | 52.95 | 49.52 |
| Zm00001d037745_P001 | Maize | plasma membrane, plastid | 51.73 | 48.66 |
| AT4G36380.1 | Thale cress | cytosol, mitochondrion, nucleus, plasma membrane | 48.27 | 45.23 |
| AT5G05690.1 | Thale cress | endoplasmic reticulum | 37.07 | 38.56 |
| AT3G50660.1 | Thale cress | endoplasmic reticulum | 34.62 | 33.14 |
| AT5G38970.1 | Thale cress | endoplasmic reticulum, golgi | 30.35 | 32.04 |
| AT3G30180.1 | Thale cress | endoplasmic reticulum, golgi | 29.94 | 31.61 |
| AT1G73340.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 30.96 | 31.21 |
| AT5G14400.2 | Thale cress | cytosol | 26.68 | 31.12 |
| AT1G12740.4 | Thale cress | endoplasmic reticulum, extracellular | 28.92 | 29.71 |
| AT3G44970.1 | Thale cress | endoplasmic reticulum, extracellular | 26.88 | 27.56 |
| AT1G55940.2 | Thale cress | endoplasmic reticulum | 27.9 | 27.18 |
| AT1G78490.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 24.64 | 25.26 |
| AT5G48000.1 | Thale cress | endoplasmic reticulum | 25.46 | 24.13 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:11.3.1.4 | EntrezGene:820582 | UniProt:A0A178VDZ8 | EMBL:AB066286 | ProteinID:AEE75404.1 |
| ArrayExpress:AT3G13730 | EnsemblPlantsGene:AT3G13730 | RefSeq:AT3G13730 | TAIR:AT3G13730 | RefSeq:AT3G13730-TAIR-G | EnsemblPlants:AT3G13730.1 |
| TAIR:AT3G13730.1 | Unigene:At.24699 | ProteinID:BAB01922.1 | EMBL:BT004084 | EMBL:BT005093 | Symbol:CYP90D1 |
| InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006629 | GO:GO:0006694 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 |
| GO:GO:0010268 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016125 | GO:GO:0016132 | GO:GO:0016491 |
| GO:GO:0016705 | GO:GO:0016709 | GO:GO:0020037 | GO:GO:0046872 | GO:GO:0048366 | GO:GO:0048441 |
| GO:GO:0048443 | GO:GO:0055114 | GO:GO:0102097 | InterPro:IPR036396 | RefSeq:NP_001327080.1 | RefSeq:NP_566462.1 |
| ProteinID:OAP03153.1 | PFAM:PF00067 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000191 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001185 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020100 | PO:PO:0025022 | PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24286 | PANTHER:PTHR24286:SF30 |
| UniProt:Q94IA6 | SUPFAM:SSF48264 | TMHMM:TMhelix | UniParc:UPI000000C270 | SEG:seg | : |
Description
CYP90D1CYP90D1 [Source:UniProtKB/TrEMBL;Acc:A0A178VDZ8]
Coordinates
chr3:-:4497893..4500920
Molecular Weight (calculated)
56156.6 Da
IEP (calculated)
9.811
GRAVY (calculated)
-0.132
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTSSSLLFF SFFFFIIIVI FNKINGLRSS PASKKKLNDH HVTSQSHGPK FPHGSLGWPV IGETIEFVSS AYSDRPESFM DKRRLMYGRV FKSHIFGTAT
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I
101: IVSTDAEVNR AVLQSDSTAF VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW SEDQPVLLQD VSKTVAFKVL
201: AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
301: MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY
401: LRSVHLDKLY YESPYKFNPW RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM KNKLPIWIKR I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.