Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
- extracellular 5
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28742 | Soybean | endoplasmic reticulum, extracellular | 90.65 | 84.58 |
| KRH69829 | Soybean | extracellular, golgi | 68.91 | 65.23 |
| VIT_04s0023g02650.t01 | Wine grape | endoplasmic reticulum, golgi | 59.35 | 56.17 |
| PGSC0003DMT400009094 | Potato | cytosol, golgi | 55.22 | 51.42 |
| Solyc02g084740.2.1 | Tomato | cytosol | 55.0 | 51.21 |
| CDX69220 | Canola | golgi, peroxisome, plastid | 48.04 | 50.8 |
| Bra011678.1-P | Field mustard | extracellular, golgi | 56.09 | 50.19 |
| CDY59695 | Canola | golgi | 55.0 | 50.1 |
| AT4G36380.1 | Thale cress | cytosol, mitochondrion, nucleus, plasma membrane | 55.43 | 48.66 |
| CDX75570 | Canola | cytosol, golgi, plastid | 55.65 | 48.58 |
| CDY64922 | Canola | plasma membrane | 54.78 | 46.49 |
| KRH47133 | Soybean | extracellular, golgi | 45.22 | 43.97 |
| KRH44159 | Soybean | golgi | 45.0 | 43.67 |
| Bra017757.1-P | Field mustard | plasma membrane | 45.22 | 43.33 |
| KRH31131 | Soybean | endoplasmic reticulum, golgi | 31.09 | 30.3 |
| KRG97749 | Soybean | endoplasmic reticulum, golgi | 30.87 | 29.96 |
| KRH14956 | Soybean | endoplasmic reticulum, golgi | 30.65 | 29.5 |
| KRH73185 | Soybean | endoplasmic reticulum, golgi | 30.43 | 29.23 |
| KRH70958 | Soybean | endoplasmic reticulum | 28.04 | 27.8 |
| KRH76802 | Soybean | extracellular, golgi | 29.57 | 27.76 |
| KRG93691 | Soybean | endoplasmic reticulum, golgi | 28.04 | 27.74 |
| KRH18341 | Soybean | endoplasmic reticulum, golgi | 27.83 | 27.47 |
| KRH27969 | Soybean | endoplasmic reticulum, vacuole | 28.48 | 27.46 |
| KRH28664 | Soybean | endoplasmic reticulum, extracellular | 29.13 | 27.4 |
| KRH01364 | Soybean | endoplasmic reticulum, golgi | 27.61 | 27.37 |
| KRH07099 | Soybean | endoplasmic reticulum, golgi | 28.04 | 27.33 |
| KRH69930 | Soybean | extracellular, golgi | 29.35 | 27.27 |
| KRH77492 | Soybean | endoplasmic reticulum, vacuole | 28.48 | 27.18 |
| KRH45089 | Soybean | endoplasmic reticulum, golgi | 27.39 | 27.16 |
| KRH09326 | Soybean | endoplasmic reticulum, golgi | 25.65 | 24.33 |
| KRH38830 | Soybean | endoplasmic reticulum, golgi | 25.22 | 23.82 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:11.3.1.4 | EMBL:ACUP02000636 | ncoils:Coil | InterPro:Cyt_P450 | InterPro:Cyt_P450_E_grp-IV |
| InterPro:Cyt_P450_sf | EnsemblPlantsGene:GLYMA_01G170000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0006629 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0010268 | GO:GO:0016125 | GO:GO:0016132 | GO:GO:0016705 | GO:GO:0016709 | GO:GO:0020037 |
| GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036396 | UniProt:K7K4B0 | EnsemblPlants:KRH76714 | ProteinID:KRH76714 |
| ProteinID:KRH76714.1 | PFAM:PF00067 | PRINTS:PR00465 | PANTHER:PTHR24286 | PANTHER:PTHR24286:SF79 | SUPFAM:SSF48264 |
| TMHMM:TMhelix | UniParc:UPI000294AFAC | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:50742780..50750080
Molecular Weight (calculated)
51880.3 Da
IEP (calculated)
8.648
GRAVY (calculated)
-0.207
Length
460 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWIICVCVV MGMLFIMNRW ILCGKNDEKT VAKGKVPKGN SGWPLLGETL DFIASGYTST PVSFLEKRKS LYGNVFKTCI LGSNVIVSTD PDVNKVVLQN
101: QANNFVPAYP KSIRELMGEQ SILKMNGTMH KKVHTLIAGF LRSPQLKARI TRDIEHAVKQ CFASWTPHQP IYVQDQVKKI TFPVLIKVLM SVGPGEDLDF
201: LYREFAEFIK GLICLPLKFP GTRLYKSLKA KDRMVKMVRK IVEERKKQLK DYNADDHGDA AVNDVVDVLL RDKVDSNSSS RLTPEMISQN IIEMMIPGEE
301: TLPTAMTMAL KFLSDSPLAV SKLQEENMEL KRLKTNCSDD YAWTDYMSLP FTQNVISETL RMANIVNGIW RKSVNDIEIK GYLIPKHWCV MASLTSVHMD
401: GKNYENPFNF DPWRWEKIGI VAGNNCFTPF GGAGTAAGTE PLPDGTGRPS PPCYNLQMDR
101: QANNFVPAYP KSIRELMGEQ SILKMNGTMH KKVHTLIAGF LRSPQLKARI TRDIEHAVKQ CFASWTPHQP IYVQDQVKKI TFPVLIKVLM SVGPGEDLDF
201: LYREFAEFIK GLICLPLKFP GTRLYKSLKA KDRMVKMVRK IVEERKKQLK DYNADDHGDA AVNDVVDVLL RDKVDSNSSS RLTPEMISQN IIEMMIPGEE
301: TLPTAMTMAL KFLSDSPLAV SKLQEENMEL KRLKTNCSDD YAWTDYMSLP FTQNVISETL RMANIVNGIW RKSVNDIEIK GYLIPKHWCV MASLTSVHMD
401: GKNYENPFNF DPWRWEKIGI VAGNNCFTPF GGAGTAAGTE PLPDGTGRPS PPCYNLQMDR
001: MQPPASAGLF RSPENLPWPY NYMDYLVAGF LVLTAGILLR PWLWLRLRNS KTKDGDEEED NEEKKKGMIP NGSLGWPVIG ETLNFIACGY SSRPVTFMDK
101: RKSLYGKVFK TNIIGTPIII STDAEVNKVV LQNHGNTFVP AYPKSITELL GENSILSING PHQKRLHTLI GAFLRSPHLK DRITRDIEAS VVLTLASWAQ
201: LPLVHVQDEI KKMTFEILVK VLMSTSPGED MNILKLEFEE FIKGLICIPI KFPGTRLYKS LKAKERLIKM VKKVVEERQV AMTTTSPAND VVDVLLRDGG
301: DSEKQSQPSD FVSGKIVEMM IPGEETMPTA MTLAVKFLSD NPVALAKLVE ENMEMKRRKL ELGEEYKWTD YMSLSFTQNV INETLRMANI INGVWRKALK
401: DVEIKGKFLN YKLIFLVMKL YNFLVGE
101: RKSLYGKVFK TNIIGTPIII STDAEVNKVV LQNHGNTFVP AYPKSITELL GENSILSING PHQKRLHTLI GAFLRSPHLK DRITRDIEAS VVLTLASWAQ
201: LPLVHVQDEI KKMTFEILVK VLMSTSPGED MNILKLEFEE FIKGLICIPI KFPGTRLYKS LKAKERLIKM VKKVVEERQV AMTTTSPAND VVDVLLRDGG
301: DSEKQSQPSD FVSGKIVEMM IPGEETMPTA MTLAVKFLSD NPVALAKLVE ENMEMKRRKL ELGEEYKWTD YMSLSFTQNV INETLRMANI INGVWRKALK
401: DVEIKGKFLN YKLIFLVMKL YNFLVGE
Arabidopsis Description
ROT3ROT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4B0]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.