Factsheet for VIT_04s0023g02650.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

cytosol 2
nucleus 1
endoplasmic reticulum 4
extracellular 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009094	Potato	cytosol, golgi	66.05	64.98
Solyc02g084740.2.1	Tomato	cytosol	65.64	64.57
KRH69829	Soybean	extracellular, golgi	62.96	62.96
KRH28742	Soybean	endoplasmic reticulum, extracellular	63.79	62.88
CDY59695	Canola	golgi	62.96	60.59
Bra011678.1-P	Field mustard	extracellular, golgi	63.79	60.31
KRH76714	Soybean	endoplasmic reticulum, extracellular	56.17	59.35
AT4G36380.1	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	63.79	59.16
CDX75570	Canola	cytosol, golgi, plastid	63.37	58.44
CDY64922	Canola	plasma membrane	63.17	56.64
CDX69220	Canola	golgi, peroxisome, plastid	48.97	54.71
Bra017757.1-P	Field mustard	plasma membrane	53.29	53.96
VIT_09s0002g02080.t01	Wine grape	endoplasmic reticulum	49.18	50.32
VIT_13s0067g00660.t01	Wine grape	cytosol	27.57	36.81
VIT_14s0066g00170.t01	Wine grape	cytosol	29.84	36.43
VIT_01s0011g00170.t01	Wine grape	endoplasmic reticulum	21.4	35.37
VIT_12s0057g01460.t01	Wine grape	endoplasmic reticulum, golgi	33.74	34.75
VIT_14s0083g01110.t01	Wine grape	endoplasmic reticulum, golgi	32.3	33.84
VIT_01s0011g00190.t01	Wine grape	endoplasmic reticulum, golgi	31.89	33.48
VIT_04s0023g01630.t01	Wine grape	endoplasmic reticulum	27.78	33.09
VIT_15s0048g01960.t01	Wine grape	cytosol	18.93	30.87
VIT_02s0025g04080.t01	Wine grape	endoplasmic reticulum, vacuole	29.84	30.72
VIT_04s0210g00160.t01	Wine grape	endoplasmic reticulum, golgi	30.66	30.04
VIT_16s0039g00290.t01	Wine grape	endoplasmic reticulum, golgi	29.63	29.63
VIT_04s0210g00150.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	29.84	28.77
VIT_18s0122g01480.t01	Wine grape	cytosol	25.93	28.7
VIT_16s0100g00610.t01	Wine grape	endoplasmic reticulum, plasma membrane	27.98	28.39
VIT_18s0001g00030.t01	Wine grape	extracellular, golgi, plasma membrane	27.37	27.94
VIT_18s0122g01460.t01	Wine grape	endoplasmic reticulum, extracellular, mitochondrion	27.37	27.94
VIT_18s0122g01470.t01	Wine grape	endoplasmic reticulum, extracellular	27.37	27.94
VIT_16s0100g00600.t01	Wine grape	endoplasmic reticulum	27.78	27.38

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100259060	wikigene:100259060	MapMan:11.3.1.4	EMBL:AM429218	ProteinID:CAN73509
ProteinID:CAN73509.1	ProteinID:CBI17435	ProteinID:CBI17435.3	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-IV
InterPro:Cyt_P450_sf	UniProt:D7SP56	EMBL:FN594959	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009965
GO:GO:0009987	GO:GO:0010268	GO:GO:0016043	GO:GO:0016049	GO:GO:0016125	GO:GO:0016132
GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0020037	GO:GO:0040007	GO:GO:0042814
GO:GO:0046872	GO:GO:0048366	GO:GO:0048441	GO:GO:0048443	GO:GO:0055114	InterPro:IPR036396
EntrezGene:LOC100259060	wikigene:LOC100259060	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00465	ScanProsite:PS00086
PANTHER:PTHR24286	PANTHER:PTHR24286:SF79	SUPFAM:SSF48264	UniParc:UPI00015CB88C	ArrayExpress:VIT_04s0023g02650	EnsemblPlantsGene:VIT_04s0023g02650
EnsemblPlants:VIT_04s0023g02650.t01	unigene:Vvi.21607	RefSeq:XP_002267958	RefSeq:XP_002267958.1	SEG:seg	:

Description

No Description!

Coordinates

chr4:+:19189535..19194113

Molecular Weight (calculated)

55341.6 Da

IEP (calculated)

9.285

GRAVY (calculated)

-0.197

Length

486 amino acids

Sequence
(BLAST)

001: MEVIHWCWVV VGVVMGWCWY KSIKNKAKEE GSGVPRGNPG WPVIGETLDF IASGWSSRPV SFMEKRKSRY GKVFKTNILG KPVIVSTDPE VNKVVLQNIG
101: NVFIPAYPQT ITEILGESSI LQMNGSLQKR VHALLGGFLR SPQLKARITR DIERYVKLTL DSWKDQHIVY VQDEVRKITF DVLVRVLVSI TPGEDLNFMK
201: REFAEVIKGL ICLPIKLPGT RLYKSLKAKE RLLKLVRRIV EERKAAMDRG DHETLKGPPN DAVDVLLRDT GDSSETSRLS LDFISSNMIE MMIPGEETLP
301: TAMTLAVKFL SDCPVALNQL MEENMELKKG KALSGEDYAW TDYMCLPFTQ NVINETLRMA NIINAVWRKA VKDVKIKDYL IPEGWGVMAS FTSIHMDEEN
401: YENPYQFNPW RWEKAASVNN NNSYTPFGGG QRLCPGLELS KLEISIFLHH LVTTYRWVAK KDDVVYFPTV KMRKKLPITV TPLPPL

Best Arabidopsis Sequence Match ( AT4G36380.1 )
(BLAST)

001: MQPPASAGLF RSPENLPWPY NYMDYLVAGF LVLTAGILLR PWLWLRLRNS KTKDGDEEED NEEKKKGMIP NGSLGWPVIG ETLNFIACGY SSRPVTFMDK
101: RKSLYGKVFK TNIIGTPIII STDAEVNKVV LQNHGNTFVP AYPKSITELL GENSILSING PHQKRLHTLI GAFLRSPHLK DRITRDIEAS VVLTLASWAQ
201: LPLVHVQDEI KKMTFEILVK VLMSTSPGED MNILKLEFEE FIKGLICIPI KFPGTRLYKS LKAKERLIKM VKKVVEERQV AMTTTSPAND VVDVLLRDGG
301: DSEKQSQPSD FVSGKIVEMM IPGEETMPTA MTLAVKFLSD NPVALAKLVE ENMEMKRRKL ELGEEYKWTD YMSLSFTQNV INETLRMANI INGVWRKALK
401: DVEIKGYLIP KGWCVLASFI SVHMDEDIYD NPYQFDPWRW DRINGSANSS ICFTPFGGGQ RLCPGLELSK LEISIFLHHL VTRYSWTAEE DEIVSFPTVK
501: MKRRLPIRVA TVDDSASPIS LEDH

Arabidopsis Description

ROT3ROT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4B0]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.