Factsheet for VIT_18s0122g01470.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0122g01480.t01	Wine grape	cytosol	83.61	90.66
VIT_18s0001g00030.t01	Wine grape	extracellular, golgi, plasma membrane	85.92	85.92
VIT_18s0122g01460.t01	Wine grape	endoplasmic reticulum, extracellular, mitochondrion	76.05	76.05
VIT_04s0210g00150.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	52.73	49.8
VIT_04s0210g00160.t01	Wine grape	endoplasmic reticulum, golgi	51.89	49.8
VIT_02s0025g04080.t01	Wine grape	endoplasmic reticulum, vacuole	48.95	49.36
Solyc04g009930.1.1	Tomato	cytosol, endoplasmic reticulum, golgi	50.42	49.28
VIT_15s0048g01960.t01	Wine grape	cytosol	30.67	48.99
VIT_16s0100g00600.t01	Wine grape	endoplasmic reticulum	46.43	44.83
VIT_16s0100g00610.t01	Wine grape	endoplasmic reticulum, plasma membrane	42.86	42.59
VIT_01s0011g00170.t01	Wine grape	endoplasmic reticulum	20.59	33.33
VIT_14s0066g00170.t01	Wine grape	cytosol	27.1	32.41
VIT_14s0083g01110.t01	Wine grape	endoplasmic reticulum, golgi	31.09	31.9
VIT_01s0011g00190.t01	Wine grape	endoplasmic reticulum, golgi	30.46	31.32
VIT_12s0057g01460.t01	Wine grape	endoplasmic reticulum, golgi	30.46	30.72
VIT_04s0023g01630.t01	Wine grape	endoplasmic reticulum	25.63	29.9
VIT_13s0067g00660.t01	Wine grape	cytosol	22.69	29.67
VIT_04s0023g02650.t01	Wine grape	endoplasmic reticulum, golgi	27.94	27.37
VIT_09s0002g02080.t01	Wine grape	endoplasmic reticulum	26.89	26.95
VIT_16s0039g00290.t01	Wine grape	endoplasmic reticulum, golgi	26.89	26.34

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100244431	wikigene:100244431	EntrezGene:100261556	wikigene:100261556	MapMan:50.1.13
ProteinID:CCB62643	ProteinID:CCB62643.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
UniProt:F6I6S5	EMBL:FN596759	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488
GO:GO:0005506	GO:GO:0005575	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0010268	GO:GO:0016020	GO:GO:0016021	GO:GO:0016125	GO:GO:0016132
GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396
EntrezGene:LOC100244431	wikigene:LOC100244431	EntrezGene:LOC100261556	wikigene:LOC100261556	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF90	SUPFAM:SSF48264	TMHMM:TMhelix
UniParc:UPI00015CD272	ArrayExpress:VIT_18s0122g01470	EnsemblPlantsGene:VIT_18s0122g01470	EnsemblPlants:VIT_18s0122g01470.t01	RefSeq:XP_002272031	RefSeq:XP_002272031.1

Description

No Description!

Coordinates

chr18:-:1039528..1042444

Molecular Weight (calculated)

53961.3 Da

IEP (calculated)

9.623

GRAVY (calculated)

0.068

Length

476 amino acids

Sequence
(BLAST)

001: MYWSVWLCVV SLFIASITHW VYKWRNPKCN GKLPPGSMGF PIIGETIQFF IPSKSLDVSS FIKKRMKKYG PLFCTNLAGR PVVVSSDPDF NYYIFQQEGK
101: LVELWYMDSI AKLVGLDTSQ SIAATGYVHK YLRNLALAHF GTEALKGRLL AKAEDMIRTR LHDWSKLPAL EFKSCVSSMI FDFTATILFG YDFETKGAHF
201: SEKFTNIIHV LMSFPLNIPG TTFHKCLKDQ KEIMKLIHDA LKEKKASPKT LQGDFLDQMI DDMKKEKFLS DDFVVFVMFG ILFASFETIS STLTLAIKLL
301: IEHPLVMQQL IEEHEAILKN REDPNSGISW KEYKSMTFTH QVINEVLRLG SVAPGILRRA IKDIQVNGYT IPAGWTIMVV PAALQLNPDT FVDPLTFNPW
401: RWKDMGVGVV AKNFIPFGGG SRLCIGAEFA KVLMTTFFHV LVTNYRLTKI KEGQIARSPV LTFGNGLHIN ISKKHG

Best Arabidopsis Sequence Match ( AT1G12740.1 )
(BLAST)

001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD

Arabidopsis Description

CYP87A2Cytochrome P450, family 87, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:Q9LN73]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.