Factsheet for VIT_18s0122g01480.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0122g01470.t01	Wine grape	endoplasmic reticulum, extracellular	90.66	83.61
VIT_18s0001g00030.t01	Wine grape	extracellular, golgi, plasma membrane	85.19	78.57
VIT_18s0122g01460.t01	Wine grape	endoplasmic reticulum, extracellular, mitochondrion	76.99	71.01
VIT_15s0048g01960.t01	Wine grape	cytosol	33.94	50.0
VIT_04s0210g00150.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	51.71	45.04
VIT_02s0025g04080.t01	Wine grape	endoplasmic reticulum, vacuole	48.29	44.92
Solyc04g009930.1.1	Tomato	cytosol, endoplasmic reticulum, golgi	49.66	44.76
VIT_04s0210g00160.t01	Wine grape	endoplasmic reticulum, golgi	50.57	44.76
VIT_16s0100g00600.t01	Wine grape	endoplasmic reticulum	46.01	40.97
VIT_16s0100g00610.t01	Wine grape	endoplasmic reticulum, plasma membrane	42.82	39.25
VIT_01s0011g00170.t01	Wine grape	endoplasmic reticulum	22.78	34.01
VIT_14s0066g00170.t01	Wine grape	cytosol	28.47	31.41
VIT_14s0083g01110.t01	Wine grape	endoplasmic reticulum, golgi	32.12	30.39
VIT_01s0011g00190.t01	Wine grape	endoplasmic reticulum, golgi	31.21	29.59
VIT_12s0057g01460.t01	Wine grape	endoplasmic reticulum, golgi	30.75	28.6
VIT_13s0067g00660.t01	Wine grape	cytosol	23.69	28.57
VIT_04s0023g01630.t01	Wine grape	endoplasmic reticulum	25.74	27.7
VIT_04s0023g02650.t01	Wine grape	endoplasmic reticulum, golgi	28.7	25.93
VIT_16s0039g00290.t01	Wine grape	endoplasmic reticulum, golgi	27.11	24.49
VIT_09s0002g02080.t01	Wine grape	endoplasmic reticulum	26.2	24.21

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ProteinID:CBI40703	ProteinID:CBI40703.3	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:D7UD88	EMBL:FN596759	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0010268	GO:GO:0016125	GO:GO:0016132	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF90	SUPFAM:SSF48264
UniParc:UPI0001BE531A	ArrayExpress:VIT_18s0122g01480	EnsemblPlantsGene:VIT_18s0122g01480	EnsemblPlants:VIT_18s0122g01480.t01	RefSeq:XP_002271954	RefSeq:XP_002271954.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr18:-:1054582..1057679

Molecular Weight (calculated)

49437.4 Da

IEP (calculated)

9.464

GRAVY (calculated)

0.034

Length

439 amino acids

Sequence
(BLAST)

001: MGFPLIGETI QFFIPSKSLD VSSFIKKRMK KYGPLFCTNL AGRPVVVSSD PDFNYYIFQQ EGKLVELWYM DSFARLVGLD PSQSITSTGY IHKYVKNLAL
101: AHIGTEALKD GLLSKAEDMI RTRLHDWSKL PAFEFKACVS SMIFDFTATS LFGYDFKMKG AHFSEKFTNI VHALIAFPLN IPGTTFHKCL KDQKEAMKLI
201: RDVLKEKKAS SKTLEGDFLD QMVDDMKNEK FLSDDFVVFV VFGFLLASFE TISSTLTLAI KLLIEHPLVM QELIEEHEAI LKNREDPNSG ISWKEYKSMT
301: FTHQVINEAL RLGSVAPGIL RRAIKDIQVN GYTIPAGWTI MVVPAALQLN PNTFVDPLAF NPWRWKDMGV GVVAKNFIPF GGGSRLCVGA EFTKVLMTTF
401: FHVLVTNYRL TKIKGGQIAR SPALTFGNGL HINISKKHQ

Best Arabidopsis Sequence Match ( AT1G12740.1 )
(BLAST)

001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD

Arabidopsis Description

CYP87A2Cytochrome P450, family 87, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:Q9LN73]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.