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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plastid
Any Predictor:golgi, peroxisome, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75570 Canola cytosol, golgi, plastid 93.79 77.42
Bra011678.1-P Field mustard extracellular, golgi 88.51 74.9
CDY59695 Canola golgi 78.85 67.92
AT4G36380.1 Thale cress cytosol, mitochondrion, nucleus, plasma membrane 81.15 67.37
CDY64922 Canola plasma membrane 81.84 65.68
VIT_04s0023g02650.t01 Wine grape endoplasmic reticulum, golgi 54.71 48.97
KRH76714 Soybean endoplasmic reticulum, extracellular 50.8 48.04
KRH69829 Soybean extracellular, golgi 52.41 46.91
Solyc02g084740.2.1 Tomato cytosol 51.03 44.94
KRH28742 Soybean endoplasmic reticulum, extracellular 50.8 44.83
PGSC0003DMT400009094 Potato cytosol, golgi 50.57 44.53
CDY23635 Canola endoplasmic reticulum, golgi 31.95 40.52
CDY37485 Canola extracellular, golgi 41.61 36.79
CDY51737 Canola endoplasmic reticulum, golgi 41.38 36.59
CDX97511 Canola extracellular, golgi 40.92 36.25
CDY14104 Canola endoplasmic reticulum 32.87 30.04
CDX98856 Canola endoplasmic reticulum, golgi 33.1 30.0
CDX70137 Canola endoplasmic reticulum, golgi 33.1 30.0
CDX80969 Canola endoplasmic reticulum 31.03 29.28
CDX89542 Canola endoplasmic reticulum, extracellular 5.52 28.92
CDY11332 Canola endoplasmic reticulum, golgi 31.03 28.18
CDX85284 Canola endoplasmic reticulum, golgi 23.68 27.84
CDX69583 Canola cytosol 25.29 25.29
CDY49400 Canola endoplasmic reticulum, golgi 28.05 24.7
CDY09852 Canola endoplasmic reticulum, extracellular 26.9 24.63
CDX91063 Canola cytosol 24.6 24.6
CDX85598 Canola cytosol 24.37 24.48
CDX77934 Canola endoplasmic reticulum, golgi 27.82 24.44
CDY24488 Canola endoplasmic reticulum, golgi 27.36 24.04
CDY26591 Canola extracellular, golgi, plasma membrane 24.83 23.48
CDY66605 Canola endoplasmic reticulum, extracellular 25.52 23.42
CDY16028 Canola extracellular, golgi 25.29 23.26
CDY60267 Canola extracellular, golgi 25.06 23.04
CDY00084 Canola endoplasmic reticulum, golgi 24.6 23.01
CDY04961 Canola cytosol 11.95 22.91
CDX96469 Canola endoplasmic reticulum, golgi 25.29 22.73
CDX86355 Canola golgi 24.14 22.58
CDX72982 Canola endoplasmic reticulum, golgi 25.06 22.52
CDY19979 Canola endoplasmic reticulum, golgi 23.91 22.37
CDY15962 Canola endoplasmic reticulum, plasma membrane 23.68 22.15
CDY35786 Canola endoplasmic reticulum, golgi 23.45 22.08
CDY66116 Canola endoplasmic reticulum, golgi 23.45 22.08
CDX99675 Canola endoplasmic reticulum 23.22 21.72
CDY04940 Canola endoplasmic reticulum, extracellular 13.33 21.56
CDY26518 Canola mitochondrion 13.33 20.21
CDY38926 Canola endoplasmic reticulum 22.07 19.32
CDY38927 Canola endoplasmic reticulum, extracellular 21.38 19.29
CDX80949 Canola extracellular, golgi, plasma membrane 22.76 19.22
CDY16450 Canola extracellular, vacuole 19.54 18.6
CDX89543 Canola cytosol 13.79 18.46
CDX99676 Canola cytosol 9.66 18.18
CDY49434 Canola golgi, vacuole 17.7 16.21
CDX76894 Canola extracellular, golgi, vacuole 17.47 16.0
Protein Annotations
Gene3D:1.10.630.10MapMan:11.3.1.4GO:A0A078BWP2EnsemblPlants:CDX69220ProteinID:CDX69220ProteinID:CDX69220.1
ncoils:CoilInterPro:Cyt_P450InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016705GO:GO:0020037GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00131024001InterPro:IPR036396PFAM:PF00067PANTHER:PTHR24286PANTHER:PTHR24286:SF79SUPFAM:SSF48264
TMHMM:TMhelixUniParc:UPI0004EF4558SEG:seg:::
Description
BnaC01g02330D
Coordinates
chrLK031789:-:3553174..3556805
Molecular Weight (calculated)
49083.9 Da
IEP (calculated)
9.137
GRAVY (calculated)
-0.131
Length
435 amino acids
Sequence
(BLAST)
001: MYIVRDGKSG FYIINSSYVF KYSPANLSLF RSPENLYSPS GFMDYWIAGF LVLTAGVLLL SWLWFRLTNS KTRDEDKQEE SEKKKGMIPK GSLGWPVIGE
101: TLTFIACGYS SRPVSFMDKR KSLYGKVFKT NIIGTPIIIS TDAEVNKVVL QNHGNTFVPA YPKSITELLG ENSILSINGA HQKRLHTLIS AFLRSPHLKE
201: RITRDIEASV ALTLASWSQL PLVHVQDEIK KMTFEILVKL LMSISPGDDL DILKLEFQEF IKGLICIPIK FPGTRLHKSL KAKERLIKIV KKVVEERQEA
301: TTESTNCPAN DAVDVLLRDV NDGGCSDKQS HPLDFVSGKI VEMMIPGEET MPTAMTLAVK FLSDNPVALA KLVEENMEMK RRKLESGKEY GWSDYMSLSF
401: TQNVINETLR MANIINGVWR KALKDVEIKG MSLYH
Best Arabidopsis Sequence Match ( AT4G36380.2 )
(BLAST)
001: MQPPASAGLF RSPENLPWPY NYMDYLVAGF LVLTAGILLR PWLWLRLRNS KTKDGDEEED NEEKKKGMIP NGSLGWPVIG ETLNFIACGY SSRPVTFMDK
101: RKSLYGKVFK TNIIGTPIII STDAEVNKVV LQNHGNTFVP AYPKSITELL GENSILSING PHQKRLHTLI GAFLRSPHLK DRITRDIEAS VVLTLASWAQ
201: LPLVHVQDEI KKMTFEILVK VLMSTSPGED MNILKLEFEE FIKGLICIPI KFPGTRLYKS LKAKERLIKM VKKVVEERQV AMTTTSPAND VVDVLLRDGG
301: DSEKQSQPSD FVSGKIVEMM IPGEETMPTA MTLAVKFLSD NPVALAKLVE ENMEMKRRKL ELGEEYKWTD YMSLSFTQNV INETLRMANI INGVWRKALK
401: DVEIKGKFLN YKLIFLVMKL YNFLVGE
Arabidopsis Description
ROT3ROT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4B0]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.