CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, extracellular

Predictor Summary:

cytosol 1
endoplasmic reticulum 5
plasma membrane 4
vacuole 5
golgi 4
extracellular 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014144.1-P	Field mustard	extracellular, vacuole	100.0	100.0
CDX76894	Canola	extracellular, golgi, vacuole	83.81	80.63
CDY49434	Canola	golgi, vacuole	83.59	80.42
CDX89542	Canola	endoplasmic reticulum, extracellular	13.79	75.9
CDY38927	Canola	endoplasmic reticulum, extracellular	70.68	67.01
CDX89543	Canola	cytosol	44.64	62.77
CDY38926	Canola	endoplasmic reticulum	67.4	61.97
AT1G78490.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	59.3	56.58
CDX80949	Canola	extracellular, golgi, plasma membrane	54.05	47.96
CDY04940	Canola	endoplasmic reticulum, extracellular	28.01	47.58
VIT_15s0048g01960.t01	Wine grape	cytosol	26.48	40.6
CDY26591	Canola	extracellular, golgi, plasma membrane	37.64	37.39
CDY16028	Canola	extracellular, golgi	38.29	37.0
CDY66605	Canola	endoplasmic reticulum, extracellular	37.64	36.29
CDY60267	Canola	extracellular, golgi	37.2	35.94
CDY04961	Canola	cytosol	17.72	35.68
CDX99676	Canola	cytosol	17.29	34.2
CDY26518	Canola	mitochondrion	19.91	31.71
CDY14104	Canola	endoplasmic reticulum	28.67	27.52
CDX91063	Canola	cytosol	26.04	27.36
CDX70137	Canola	endoplasmic reticulum, golgi	28.67	27.29
CDX98856	Canola	endoplasmic reticulum, golgi	28.67	27.29
CDX85598	Canola	cytosol	25.82	27.25
CDX69583	Canola	cytosol	25.6	26.9
CDX99675	Canola	endoplasmic reticulum	27.13	26.67
CDY49400	Canola	endoplasmic reticulum, golgi	28.67	26.52
CDY11332	Canola	endoplasmic reticulum, golgi	27.79	26.51
CDY09852	Canola	endoplasmic reticulum, extracellular	27.35	26.32
CDX86355	Canola	golgi	26.7	26.24
CDY24488	Canola	endoplasmic reticulum, golgi	28.23	26.06
CDX77934	Canola	endoplasmic reticulum, golgi	28.23	26.06
CDY00084	Canola	endoplasmic reticulum, golgi	26.48	26.02
CDX97511	Canola	extracellular, golgi	27.79	25.87
CDY51737	Canola	endoplasmic reticulum, golgi	27.79	25.81
CDY37485	Canola	extracellular, golgi	27.79	25.81
CDY19979	Canola	endoplasmic reticulum, golgi	26.04	25.59
CDY35786	Canola	endoplasmic reticulum, golgi	25.82	25.54
CDX80969	Canola	endoplasmic reticulum	25.6	25.38
CDY66116	Canola	endoplasmic reticulum, golgi	25.6	25.32
CDY59695	Canola	golgi	27.79	25.15
CDX72982	Canola	endoplasmic reticulum, golgi	26.04	24.59
CDX96469	Canola	endoplasmic reticulum, golgi	26.04	24.59
CDY64922	Canola	plasma membrane	28.01	23.62
CDX75570	Canola	cytosol, golgi, plastid	26.91	23.34
CDY15962	Canola	endoplasmic reticulum, plasma membrane	23.63	23.23
CDX85284	Canola	endoplasmic reticulum, golgi	17.72	21.89
CDX69220	Canola	golgi, peroxisome, plastid	18.6	19.54
CDY23635	Canola	endoplasmic reticulum, golgi	14.0	18.66

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	GO:A0A078FPN9	UniProt:A0A078FPN9	EnsemblPlants:CDY16450	ProteinID:CDY16450
ProteinID:CDY16450.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037
GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00091014001	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00465	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF11	SUPFAM:SSF48264	TMHMM:TMhelix
UniParc:UPI0002546727	:	:	:	:	:

Description

BnaA08g03170DBnaA08g03170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FPN9]

Coordinates

chrLK032064:+:21224..23296

Molecular Weight (calculated)

52493.8 Da

IEP (calculated)

9.593

GRAVY (calculated)

-0.094

Length

457 amino acids

Sequence
(BLAST)

001: MSFMWNVVYV IIALVIVKIS QWLWQWSNPN SKGSGKLPPG SMGFPIIGET IEFFKSSGLL EIPPFFQKRM LRYGPLFRTN ILGSRTVIST DTDVIFEIFR
101: QENQSFVQSY PDVFVKRKMI GFMNRTTREH LRWKASEGAF NLRHAVSTLI VSYITPQMIS NLKPETEAKL IDNFMAFNIE WFQSPFALST WNNLFKVLRA
201: RKEAAKIINV ALERRKDSIL EKQGDFLDTL LEEMKKEGSI FDQASIVNLL LNIGVVSRDT TSHATALTVD FISKNPRVLT ELQREHEAIV QKRDDKEAGL
301: SWEEYKDCMP FTRMVIYESL RLANLGTIIF RKAVKDVVIK GKLEVKRYTI PAGWIVAVAP SVVHYNAEIY ENPLEFNPWR WEGKDLRSPG SKTLMVFGGG
401: ARQCVGSDLA RLHLAIFLHH FVTTYDFSVV QECEIYRVPF PCFTKDLHIN ISPKSPS

Best Arabidopsis Sequence Match ( AT1G78490.1 )
(BLAST)

001: MSSIWNVAML MVALVVVRIS HWLYRWSNPK CPGKLPPGSM GFPIIGETLD FFKPCGVEGI PTFVKKRMIR YGPLFRTNIF GSKTVVSTDP DVIHQIFRQE
101: NTSFELGYPD IFVKVFGKDN LFLKEVFIHK YLQKITMQIL GSEGLKQTML GNMDKATRDH IRSIASQGSF NVRKEVENLV VAYMTPKLIS NLKPETQSKL
201: IDNLNAFNLD WFKSFLRLST WKAVTKALKS REEAIQVMKD VLMMRKETRE KQEDFLNTLL EELEKDGSFF DQGSAINLIF LLAFALREGT SSCTALAVKF
301: ISKDPKVLAE LKREHKAIVD NRKDKEAGVS WEEYRHNMTF TNMVSNEVLR LANTTPLLFR KAVQDVEIKG YTIPAGWIVA VAPSAVHFDP AIYENPFEFN
401: PWRWEGKEMI WGSKTFMAFG YGVRLCVGAE FSRLQMAIFL HHLVAYYDFS MVQDSEIIRS PFHQYTKDLL INISQSPTK

Arabidopsis Description

CYP708A3CYP708A3 [Source:UniProtKB/TrEMBL;Acc:A0A178WMR8]
SUBAcon: [extracellular,vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.