Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04940 | Canola | endoplasmic reticulum, extracellular | 60.24 | 18.59 |
| CDY38926 | Canola | endoplasmic reticulum | 98.8 | 16.5 |
| CDY38927 | Canola | endoplasmic reticulum, extracellular | 84.34 | 14.52 |
| CDY16450 | Canola | extracellular, vacuole | 75.9 | 13.79 |
| CDY49434 | Canola | golgi, vacuole | 73.49 | 12.84 |
| CDX76894 | Canola | extracellular, golgi, vacuole | 73.49 | 12.84 |
| AT1G55940.2 | Thale cress | endoplasmic reticulum | 62.65 | 10.32 |
| CDX80949 | Canola | extracellular, golgi, plasma membrane | 59.04 | 9.51 |
| CDX85284 | Canola | endoplasmic reticulum, golgi | 36.14 | 8.11 |
| CDY60267 | Canola | extracellular, golgi | 45.78 | 8.03 |
| CDY26591 | Canola | extracellular, golgi, plasma membrane | 43.37 | 7.83 |
| CDY16028 | Canola | extracellular, golgi | 43.37 | 7.61 |
| CDY66605 | Canola | endoplasmic reticulum, extracellular | 43.37 | 7.59 |
| CDY23635 | Canola | endoplasmic reticulum, golgi | 28.92 | 7.0 |
| CDY00084 | Canola | endoplasmic reticulum, golgi | 36.14 | 6.45 |
| CDX86355 | Canola | golgi | 36.14 | 6.45 |
| CDY35786 | Canola | endoplasmic reticulum, golgi | 34.94 | 6.28 |
| CDY19979 | Canola | endoplasmic reticulum, golgi | 34.94 | 6.24 |
| CDX99675 | Canola | endoplasmic reticulum | 34.94 | 6.24 |
| CDY66116 | Canola | endoplasmic reticulum, golgi | 33.73 | 6.06 |
| CDY15962 | Canola | endoplasmic reticulum, plasma membrane | 33.73 | 6.02 |
| CDY09852 | Canola | endoplasmic reticulum, extracellular | 33.73 | 5.89 |
| CDX69220 | Canola | golgi, peroxisome, plastid | 28.92 | 5.52 |
| CDX85598 | Canola | cytosol | 27.71 | 5.31 |
| CDX69583 | Canola | cytosol | 27.71 | 5.29 |
| CDX91063 | Canola | cytosol | 27.71 | 5.29 |
| CDX97511 | Canola | extracellular, golgi | 28.92 | 4.89 |
| CDY51737 | Canola | endoplasmic reticulum, golgi | 28.92 | 4.88 |
| CDY37485 | Canola | extracellular, golgi | 28.92 | 4.88 |
| CDY14104 | Canola | endoplasmic reticulum | 27.71 | 4.83 |
| CDY11332 | Canola | endoplasmic reticulum, golgi | 27.71 | 4.8 |
| CDX80969 | Canola | endoplasmic reticulum | 26.51 | 4.77 |
| CDY49400 | Canola | endoplasmic reticulum, golgi | 27.71 | 4.66 |
| CDX98856 | Canola | endoplasmic reticulum, golgi | 26.51 | 4.58 |
| CDX70137 | Canola | endoplasmic reticulum, golgi | 26.51 | 4.58 |
| CDY59695 | Canola | golgi | 27.71 | 4.55 |
| CDX75570 | Canola | cytosol, golgi, plastid | 28.92 | 4.55 |
| CDY24488 | Canola | endoplasmic reticulum, golgi | 26.51 | 4.44 |
| CDX77934 | Canola | endoplasmic reticulum, golgi | 26.51 | 4.44 |
| CDY64922 | Canola | plasma membrane | 27.71 | 4.24 |
| CDX96469 | Canola | endoplasmic reticulum, golgi | 24.1 | 4.13 |
| CDX72982 | Canola | endoplasmic reticulum, golgi | 24.1 | 4.13 |
| CDX89543 | Canola | cytosol | 4.82 | 1.23 |
| CDY26518 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX99676 | Canola | cytosol | 0.0 | 0.0 |
| CDY04961 | Canola | cytosol | 0.0 | 0.0 |
| VIT_15s0048g01960.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX89542 | EnsemblPlantsGene:GSBRNA2T00149850001 | Gene3D:1.10.630.10 | GO:A0A078DL14 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016705 | GO:GO:0020037 |
| GO:GO:0055114 | InterPro:Cyt_P450_sf | InterPro:IPR036396 | PANTHER:PTHR24286 | PANTHER:PTHR24286:SF11 | ProteinID:CDX89542 |
| ProteinID:CDX89542.1 | SUPFAM:SSF48264 | UniParc:UPI0004EE119A | MapMan:35.1 | : | : |
Description
BnaC04g35610D
Coordinates
chrLK031859:+:977817..978182
Molecular Weight (calculated)
9717.1 Da
IEP (calculated)
9.365
GRAVY (calculated)
0.208
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: MSFMWNVEII IIALVVVRIS QWLYRWSNPN VRCNGKLPPG SMGFPIIGET IEFFKPCELL EIPSFFQNRM QRYGSLFRSN IMG
001: MSSIWNVAML MVALVVVRIS HWLYRWSNPK CPGKLPPGSM GFPIIGETLD FFKPCGVEGI PTFVKKRMIR YGPLFRTNIF GSKTVVSTDP DVIHQIFRQE
101: NTSFELGYPD IFVKVFGKDN LFLKEVFIHK YLQKITMQIL GSEGLKQTML GNMDKATRDH IRSIASQGSF NVRKEVENLV VAYMTPKLIS NLKPETQSKL
201: IDNLNAFNLD WFKSFLRLST WKAVTKALKS REEAIQVMKD VLMMRKETRE KQEDFLNTLL EELEKDGSFF DQGSAINLIF LLAFALREGT SSCTALAVKF
301: ISKDPKVLAE LKREHKAIVD NRKDKEAGVS WEEYRHNMTF TNMVSNEVLR LANTTPLLFR KAVQDVEIKG YTIPAGWIVA VAPSAVHFDP AIYENPFEFN
401: PWRWEVLVIH LL
101: NTSFELGYPD IFVKVFGKDN LFLKEVFIHK YLQKITMQIL GSEGLKQTML GNMDKATRDH IRSIASQGSF NVRKEVENLV VAYMTPKLIS NLKPETQSKL
201: IDNLNAFNLD WFKSFLRLST WKAVTKALKS REEAIQVMKD VLMMRKETRE KQEDFLNTLL EELEKDGSFF DQGSAINLIF LLAFALREGT SSCTALAVKF
301: ISKDPKVLAE LKREHKAIVD NRKDKEAGVS WEEYRHNMTF TNMVSNEVLR LANTTPLLFR KAVQDVEIKG YTIPAGWIVA VAPSAVHFDP AIYENPFEFN
401: PWRWEVLVIH LL
Arabidopsis Description
CYP708A3CYP708A3 [Source:UniProtKB/TrEMBL;Acc:A0A178WMR8]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.