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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d052475_P001 Maize golgi, vacuole 88.72 90.66
Zm00001d004957_P001 Maize plastid 85.99 85.99
Os12t0139300-01 Rice endoplasmic reticulum, golgi 82.68 84.83
Os11t0143200-01 Rice endoplasmic reticulum, golgi 82.1 84.23
TraesCS5D01G139900.1 Wheat endoplasmic reticulum, golgi 80.93 83.53
TraesCS5B01G133400.1 Wheat endoplasmic reticulum, golgi 80.93 83.53
TraesCS5A01G131400.1 Wheat endoplasmic reticulum, golgi 80.54 82.97
HORVU5Hr1G043140.1 Barley endoplasmic reticulum 80.16 82.73
GSMUA_Achr3P08890_001 Banana endoplasmic reticulum, vacuole 61.67 64.69
CDY04961 Canola cytosol 28.21 63.88
GSMUA_Achr8P00150_001 Banana endoplasmic reticulum, golgi 59.34 63.41
CDX98856 Canola endoplasmic reticulum, golgi 57.39 61.46
KRG97749 Soybean endoplasmic reticulum, golgi 56.61 61.39
CDX70137 Canola endoplasmic reticulum, golgi 57.2 61.25
Bra009126.1-P Field mustard endoplasmic reticulum 53.31 60.75
KRH31131 Soybean endoplasmic reticulum, golgi 55.64 60.59
AT5G05690.1 Thale cress endoplasmic reticulum 55.45 60.38
VIT_13s0067g00660.t01 Wine grape cytosol 41.63 58.79
PGSC0003DMT400061190 Potato endoplasmic reticulum, golgi 55.64 58.37
KRH14956 Soybean endoplasmic reticulum, golgi 54.09 58.16
KRH73185 Soybean endoplasmic reticulum, golgi 54.09 58.04
CDY14104 Canola endoplasmic reticulum 53.5 57.77
Solyc06g051750.2.1 Tomato endoplasmic reticulum, golgi 54.67 57.7
Bra028751.1-P Field mustard endoplasmic reticulum, golgi 42.02 57.14
CDY11332 Canola endoplasmic reticulum, golgi 51.75 55.53
Bra005863.1-P Field mustard endoplasmic reticulum, golgi 51.56 55.32
CDX80969 Canola endoplasmic reticulum 48.83 54.45
EER92600 Sorghum endoplasmic reticulum 35.41 36.04
EES10969 Sorghum endoplasmic reticulum 32.88 34.56
EES02301 Sorghum endoplasmic reticulum, golgi, plastid 34.05 34.38
EER93839 Sorghum endoplasmic reticulum 30.74 33.98
KXG30524 Sorghum endoplasmic reticulum 32.1 33.81
EES17857 Sorghum plastid 34.44 33.71
EES05736 Sorghum endoplasmic reticulum 31.13 33.2
KXG37898 Sorghum endoplasmic reticulum 29.38 31.39
EES12690 Sorghum endoplasmic reticulum 31.52 31.33
EER91122 Sorghum endoplasmic reticulum 29.18 31.12
OQU82181 Sorghum endoplasmic reticulum, golgi, vacuole 29.18 30.36
OQU91239 Sorghum plastid 29.57 29.51
EER91217 Sorghum endoplasmic reticulum, golgi 27.43 29.31
KXG39740 Sorghum endoplasmic reticulum 27.04 29.08
EER91216 Sorghum endoplasmic reticulum 27.24 29.05
KXG34804 Sorghum cytosol 24.71 28.6
KXG28806 Sorghum extracellular, plasma membrane 25.49 28.42
KXG27894 Sorghum endoplasmic reticulum, plasma membrane 26.26 27.55
KXG34877 Sorghum endoplasmic reticulum, extracellular 24.32 26.21
Protein Annotations
Gene3D:1.10.630.10MapMan:11.3.1.2UniProt:A0A1Z5RHE5InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0000003GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488
GO:GO:0005506GO:GO:0006629GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009628GO:GO:0009653GO:GO:0009791GO:GO:0009908GO:GO:0009911GO:GO:0009987
GO:GO:0010224GO:GO:0010268GO:GO:0010584GO:GO:0016043GO:GO:0016132GO:GO:0016491
GO:GO:0016705GO:GO:0020037GO:GO:0030154GO:GO:0046872GO:GO:0048657GO:GO:0055114
InterPro:IPR036396EnsemblPlants:OQU82855ProteinID:OQU82855ProteinID:OQU82855.1PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24286PANTHER:PTHR24286:SF44EnsemblPlantsGene:SORBI_3005G030400SUPFAM:SSF48264
TMHMM:TMhelixUniParc:UPI000B423A3FSEG:seg:::
Description
hypothetical protein
Coordinates
chr5:-:2705723..2709254
Molecular Weight (calculated)
56747.6 Da
IEP (calculated)
9.613
GRAVY (calculated)
-0.110
Length
514 amino acids
Sequence
(BLAST)
001: MDAGGSPPLF LLAAAATAVL AAAALGWLLL AGGRAAAAGR RRRSASSAPR LPPGSTGLPL IGETLRLIAA YKTPNPEPFI DERVARHGSG VFTTHVFGER
101: TVFSADPAFN RLLLAAEGRA VSCSYPSSIA TLLGPRSLLL TAGPAHKRLH SLTLTRLGRP ASPPLLAHID RLVLATMRDW GRPGAAPVRL LDEAKKITFN
201: LTVWQLVSIE PGPWTESVRR EYVKLIDGFF SIPFPFAYLL PFTVYGQALK ARKKVAGALR EVIRKRMDEK AETGGASKNG EDEEKREKKD MVEELLEAEG
301: GSFSVEEMVD FCLSLLVAGY ETTSVLMTLA VKFLTETPAA LAQLKEEHDN IRGIKGKDQP LEWSDYKSMP FTQCVISETL RVANLIGGVF RRANTDIHFK
401: DYVIPKGCKI FASFRAVHLN LEHYENARTF DPWRWQSKNK LQNAEGASLF TPFGGGPRLC PGYELARVVV SVFLHHLVTC FSWEEAEEDR IVFFPTTRTL
501: KGYPINLRRR PDYA
Best Arabidopsis Sequence Match ( AT5G05690.1 )
(BLAST)
001: MAFTAFLLLL SSIAAGFLLL LRRTRYRRMG LPPGSLGLPL IGETFQLIGA YKTENPEPFI DERVARYGSV FMTHLFGEPT IFSADPETNR FVLQNEGKLF
101: ECSYPASICN LLGKHSLLLM KGSLHKRMHS LTMSFANSSI IKDHLMLDID RLVRFNLDSW SSRVLLMEEA KKITFELTVK QLMSFDPGEW SESLRKEYLL
201: VIEGFFSLPL PLFSTTYRKA IQARRKVAEA LTVVVMKRRE EEEEGAERKK DMLAALLAAD DGFSDEEIVD FLVALLVAGY ETTSTIMTLA VKFLTETPLA
301: LAQLKEEHEK IRAMKSDSYS LEWSDYKSMP FTQCVVNETL RVANIIGGVF RRAMTDVEIK GYKIPKGWKV FSSFRAVHLD PNHFKDARTF NPWRWQSNSV
401: TTGPSNVFTP FGGGPRLCPG YELARVALSV FLHRLVTGFS WVPAEQDKLV FFPTTRTQKR YPIFVKRRDF AT
Arabidopsis Description
CYP90A1DWF3 [Source:UniProtKB/TrEMBL;Acc:A0A178UQC4]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.