CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91217	Sorghum	endoplasmic reticulum, golgi	96.06	96.26
Zm00001d013719_P001	Maize	endoplasmic reticulum	85.89	84.32
Zm00001d013720_P001	Maize	endoplasmic reticulum, golgi	85.68	84.11
KXG37898	Sorghum	endoplasmic reticulum	74.48	74.64
EER91122	Sorghum	endoplasmic reticulum	72.2	72.2
OQU91239	Sorghum	plastid	71.58	66.99
TraesCS2B01G385100.1	Wheat	cytosol	46.89	62.26
HORVU2Hr1G088750.2	Barley	cytosol, endoplasmic reticulum	52.07	60.19
TraesCS7D01G117200.1	Wheat	endoplasmic reticulum	59.34	58.85
TraesCS2B01G616600.1	Wheat	endoplasmic reticulum, plasma membrane	59.13	58.04
TraesCS2D01G002800.1	Wheat	endoplasmic reticulum, plasma membrane	59.13	58.04
TraesCS6B01G407100.1	Wheat	endoplasmic reticulum, golgi	59.34	57.89
TraesCS2D01G364700.1	Wheat	endoplasmic reticulum	58.71	57.64
TraesCS2A01G367800.1	Wheat	extracellular, plasma membrane	58.3	57.23
TraesCS6B01G407000.1	Wheat	golgi	58.51	57.09
TraesCS5A01G307700.1	Wheat	endoplasmic reticulum, plasma membrane	57.47	56.53
TraesCS5B01G308300.1	Wheat	endoplasmic reticulum, plasma membrane	57.26	56.33
Os03t0658800-01	Rice	endoplasmic reticulum	57.68	56.16
Os10t0179200-00	Rice	cytosol	43.98	55.64
PGSC0003DMT400007849	Potato	cytosol	26.14	51.01
GSMUA_Achr5P10500_001	Banana	endoplasmic reticulum, vacuole	42.53	49.88
VIT_02s0025g04080.t01	Wine grape	endoplasmic reticulum, vacuole	47.1	48.09
EES05736	Sorghum	endoplasmic reticulum	47.3	47.3
Solyc08g080430.1.1	Tomato	endoplasmic reticulum, vacuole	46.06	46.64
GSMUA_Achr5P10490_001	Banana	plasma membrane, vacuole	46.89	46.6
KRH27969	Soybean	endoplasmic reticulum, vacuole	45.85	46.33
KRH77492	Soybean	endoplasmic reticulum, vacuole	45.85	45.85
CDY66605	Canola	endoplasmic reticulum, extracellular	45.02	45.78
CDY60267	Canola	extracellular, golgi	44.81	45.67
AT1G12740.4	Thale cress	endoplasmic reticulum, extracellular	45.23	45.61
Bra019782.1-P	Field mustard	endoplasmic reticulum, extracellular	45.02	45.59
CDY26591	Canola	extracellular, golgi, plasma membrane	43.36	45.43
CDY16028	Canola	extracellular, golgi	44.4	45.24
PGSC0003DMT400014907	Potato	cytosol	34.65	44.3
Solyc08g007900.1.1	Tomato	nucleus	42.95	43.95
KXG39740	Sorghum	endoplasmic reticulum	43.57	43.93
OQU82181	Sorghum	endoplasmic reticulum, golgi, vacuole	44.61	43.52
EES12690	Sorghum	endoplasmic reticulum	45.23	42.17
KXG27894	Sorghum	endoplasmic reticulum, plasma membrane	42.53	41.84
KXG34804	Sorghum	cytosol	36.51	39.64
Bra026956.1-P	Field mustard	extracellular, golgi	27.39	39.64
KXG34877	Sorghum	endoplasmic reticulum, extracellular	37.97	38.36
KXG28806	Sorghum	extracellular, plasma membrane	36.31	37.96
EER93839	Sorghum	endoplasmic reticulum	31.33	32.47
EER92600	Sorghum	endoplasmic reticulum	33.2	31.68
EES10969	Sorghum	endoplasmic reticulum	28.84	28.43
KXG30524	Sorghum	endoplasmic reticulum	28.63	28.28
OQU82855	Sorghum	endoplasmic reticulum	29.05	27.24
EES02301	Sorghum	endoplasmic reticulum, golgi, plastid	28.22	26.72
EES17857	Sorghum	plastid	28.01	25.71

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	EntrezGene:8062255	UniProt:C5WS77	ncoils:Coil	InterPro:Cyt_P450
InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-IV	InterPro:Cyt_P450_sf	EnsemblPlants:EER91216	ProteinID:EER91216	ProteinID:EER91216.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0006629
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0010268	GO:GO:0016125
GO:GO:0016132	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00465	ScanProsite:PS00086	PANTHER:PTHR24286
PANTHER:PTHR24286:SF81	EnsemblPlantsGene:SORBI_3001G164100	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI0001A8219D	RefSeq:XP_002464218.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:13554468..13557662

Molecular Weight (calculated)

54996.3 Da

IEP (calculated)

9.085

GRAVY (calculated)

-0.097

Length

482 amino acids

Sequence
(BLAST)

001: MSMHYLVAVS MTCLALGVGA ILVLRWRNGG RTCEGGRLPP GSRGLPFIGE TLQYFLAASS TLGLLPPFFK KRLERYGPIF RTSLVGEDLI VSLDAELNAH
101: ILKQEERGFQ IWYPPSFMRV FGADNITSKI GVLHLHMRTL VLRLFGHQTI QSVLLHDVQR SARDELRSWL DRPDVEVRTA ISRMIFGVTA KKLISHDDAA
201: SGGRLWECFH DWTSGLLSFP VPIPGTTFYK CMQGRKNVMK MLKQQLGERR NAAERETVDF FDLVIDELNK PNPMMDESTA LDLLFMMLFG SHETTSMVLT
301: VILKYLTDNR KALQELTEEH ERILERRVDP DSDITWEEYK SMKFTSHVIH ESLRLANIAL VMFRKADQDV HTNGYTIPKG SKIMICPLAS HLNMKVYENP
401: SVFNPWRWKN IPEPVGASKD FMAFGGGLRL CAGADFSKMQ MAMFLHYLVR NYRWKTVSGG IMVFYPGLQF PDGFHIQLLP KI

Best Arabidopsis Sequence Match ( AT1G12740.1 )
(BLAST)

001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD

Arabidopsis Description

CYP87A2Cytochrome P450, family 87, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:Q9LN73]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.