Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 1
- extracellular 1
- endoplasmic reticulum 2
- golgi 1
- vacuole 1
- mitochondrion 1
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G194700.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS6B01G463400.1 | Wheat | endoplasmic reticulum | 55.56 | 90.66 |
| TraesCSU01G225000.1 | Wheat | cytosol | 87.88 | 87.88 |
| TraesCSU01G083000.1 | Wheat | cytosol | 47.81 | 77.17 |
| TraesCSU01G205200.1 | Wheat | cytosol | 72.73 | 69.23 |
| TraesCSU01G219700.1 | Wheat | cytosol | 64.31 | 63.67 |
| TraesCSU01G181200.1 | Wheat | cytosol | 63.3 | 61.64 |
| TraesCSU01G213400.1 | Wheat | cytosol | 63.3 | 61.64 |
| TraesCSU01G082700.1 | Wheat | cytosol | 62.63 | 60.0 |
| TraesCSU01G018700.1 | Wheat | cytosol | 33.33 | 33.9 |
| TraesCS6D01G399600.2 | Wheat | cytosol | 52.53 | 17.75 |
Protein Annotations
| EnsemblPlants:TraesCSU01G222500.1 | EnsemblPlantsGene:TraesCSU01G222500 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | InterPro:RX-like_CC | ncoils:Coil | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF9 | PFAM:PF00931 | SUPFAM:SSF52540 | TIGR:cd14798 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrUn:-:328963892..328964785
Molecular Weight (calculated)
33557.7 Da
IEP (calculated)
8.351
GRAVY (calculated)
-0.352
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEAALVSV ATGVLKPVIG KLTVLLGNEY KRFKTVRKEI KSLTNELAAM EAFLLKMSEE EDPDVQDKVW MNEVRELSYD LEDAIDDFMQ SIGDKDEKPD
101: GFIEKVKNSL GKLGKMKARR RIGKEIQDLK KQIKEVGERN ARYKGREAFS NSKNATVDPR ALAIFEHASK LVGIDEPKAE IIKLLTEEDV RASEQQQQPK
201: IVSITGPGGM GKTTLANQVY QELKGKYECW AFISVSRNPD MTNVLRTILS EVAKKDYATT EAGNIQQLII KIIDFLADKR YILSLIFFHF YLSSLNV
101: GFIEKVKNSL GKLGKMKARR RIGKEIQDLK KQIKEVGERN ARYKGREAFS NSKNATVDPR ALAIFEHASK LVGIDEPKAE IIKLLTEEDV RASEQQQQPK
201: IVSITGPGGM GKTTLANQVY QELKGKYECW AFISVSRNPD MTNVLRTILS EVAKKDYATT EAGNIQQLII KIIDFLADKR YILSLIFFHF YLSSLNV
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.