Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G225000.1 | Wheat | cytosol | 18.2 | 53.87 |
| TraesCSU01G194700.1 | Wheat | cytosol | 17.75 | 52.53 |
| TraesCSU01G222500.1 | Wheat | cytosol | 17.75 | 52.53 |
| TraesCS6B01G463400.1 | Wheat | endoplasmic reticulum | 10.69 | 51.65 |
| TraesCS6D01G398900.1 | Wheat | cytosol | 17.52 | 51.16 |
| TraesCS6D01G398600.1 | Wheat | cytosol, extracellular | 16.04 | 49.3 |
| TraesCS6D01G399300.1 | Wheat | cytosol, endoplasmic reticulum | 11.26 | 40.74 |
| TraesCS6D01G369700.1 | Wheat | cytosol | 10.24 | 40.36 |
| TraesCS1D01G030200.1 | Wheat | cytosol | 6.37 | 29.63 |
| TraesCS1D01G025200.1 | Wheat | cytosol | 7.62 | 29.39 |
| TraesCS6D01G373200.1 | Wheat | cytosol | 8.42 | 26.62 |
| TraesCS6D01G373100.1 | Wheat | cytosol | 4.55 | 20.3 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF25 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS6D01G399600 | EnsemblPlants:TraesCS6D01G399600.2 |
| TIGR:cd14798 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:469984909..469990936
Molecular Weight (calculated)
99179.0 Da
IEP (calculated)
7.249
GRAVY (calculated)
-0.220
Length
879 amino acids
Sequence
(BLAST)
(BLAST)
001: MNEVRELSYD LEDAIDDFMQ SVGDKDEKPD GFIEKIKNSL GKLGKMKARH RIGKEIQDLK KQIKEVGDRN ARYKGRQTFS STKNEVVDPR ILARFEHASK
101: LVGIDETKAE IIKLLGEENG QVPRQQQLKI VSIVGFGGMG KTTLANQVYQ DLKGEFQYRA FISVSRNPDL MKILRTILSE ITGISYPGTE AGCIEQLIDK
201: IKDFLADKRY LIVIDDIWDI KHWEVIRCAL ADNHYENRVI TTTRDRDVAR KVGGAYELKP LPDETSKILF FGRIFGINND CPDDLVEVSE TLLKKCGGVP
301: LAIITIAGLL ASREGNKREW NKLCDSIGSG LDNSPDVKTM RNILALSYRH LPIHLKTCLL YLSIFPEDYI IQGSRLIWRW ICEGFVNGVQ DEDLFELGES
401: YLTELINRGL IQAVDSYRYV RTTDCRVHDL VLEFISSISI EENFCTVLHD KKAKSAAITS KVRRLFLQLQ DVEMPQGRLI LSHMRSLTVS GVDKMSPLSF
501: SPQLRVLDLE DCYLQEQRHK LLEHLGSLCQ LRYLALGDIY PSELLLPIQI GQLKHLIFLS VGGRSKNKFR PGVISKLEAL QVLLSISLSK SPHIAKELRH
601: LTKLRVLTFS LEGMPDESFK GWISESLVHL ENLQSLIVHA PYRLDEESAC LDFLGEGWMP PPRNRRRFVS PFGKFSYLPS WINPSNLREL SMIEIGLGHL
701: RQKDLDILGS FPVLQSLRLS CYKNIWDEER KQWPVISADT FQCLQECKLG ILPTGGNMFA PGAMPKVQSL TFSFSLGLAI LPSLRDSLGL ENLPSLQDLH
801: VYFSEFTDGS VTQQAYDQAE AAISCAADNH PNRPTLQLGL SWPANDATAW LPPLPRPARP PSNATDAAPA ARLPPRAGR
101: LVGIDETKAE IIKLLGEENG QVPRQQQLKI VSIVGFGGMG KTTLANQVYQ DLKGEFQYRA FISVSRNPDL MKILRTILSE ITGISYPGTE AGCIEQLIDK
201: IKDFLADKRY LIVIDDIWDI KHWEVIRCAL ADNHYENRVI TTTRDRDVAR KVGGAYELKP LPDETSKILF FGRIFGINND CPDDLVEVSE TLLKKCGGVP
301: LAIITIAGLL ASREGNKREW NKLCDSIGSG LDNSPDVKTM RNILALSYRH LPIHLKTCLL YLSIFPEDYI IQGSRLIWRW ICEGFVNGVQ DEDLFELGES
401: YLTELINRGL IQAVDSYRYV RTTDCRVHDL VLEFISSISI EENFCTVLHD KKAKSAAITS KVRRLFLQLQ DVEMPQGRLI LSHMRSLTVS GVDKMSPLSF
501: SPQLRVLDLE DCYLQEQRHK LLEHLGSLCQ LRYLALGDIY PSELLLPIQI GQLKHLIFLS VGGRSKNKFR PGVISKLEAL QVLLSISLSK SPHIAKELRH
601: LTKLRVLTFS LEGMPDESFK GWISESLVHL ENLQSLIVHA PYRLDEESAC LDFLGEGWMP PPRNRRRFVS PFGKFSYLPS WINPSNLREL SMIEIGLGHL
701: RQKDLDILGS FPVLQSLRLS CYKNIWDEER KQWPVISADT FQCLQECKLG ILPTGGNMFA PGAMPKVQSL TFSFSLGLAI LPSLRDSLGL ENLPSLQDLH
801: VYFSEFTDGS VTQQAYDQAE AAISCAADNH PNRPTLQLGL SWPANDATAW LPPLPRPARP PSNATDAAPA ARLPPRAGR
001: MAGELVSFGI KKLWDLLSQE CEQFQGVEDQ VTGLKRDLNL LSSFLKDADA KKHTTAVVRN VVEEIKEIVY DAEDIIETYL LKEKLWKTSG IKMRIRRHAC
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK
Arabidopsis Description
Probable disease resistance protein At1g58390 [Source:UniProtKB/Swiss-Prot;Acc:Q8W474]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.