Subcellular Localization
min:
: max
Winner_takes_all: cytosol, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 2
- extracellular 3
- endoplasmic reticulum 2
- golgi 2
- vacuole 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G083000.1 | Wheat | cytosol | 55.24 | 85.87 |
| TraesCS6B01G463800.1 | Wheat | cytosol | 67.13 | 72.18 |
| TraesCS6D01G398900.1 | Wheat | cytosol | 67.48 | 64.12 |
| TraesCS6D01G399300.1 | Wheat | cytosol, endoplasmic reticulum | 48.95 | 57.61 |
| TraesCS6D01G369700.1 | Wheat | cytosol | 37.76 | 48.43 |
| TraesCS6D01G373100.1 | Wheat | cytosol | 25.17 | 36.55 |
| TraesCS6D01G373200.1 | Wheat | cytosol | 33.57 | 34.53 |
| TraesCS1D01G030200.1 | Wheat | cytosol | 20.98 | 31.75 |
| TraesCS1D01G025200.1 | Wheat | cytosol | 24.48 | 30.7 |
| TraesCS6D01G399600.2 | Wheat | cytosol | 49.3 | 16.04 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G398600.1 | EnsemblPlantsGene:TraesCS6D01G398600 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | InterPro:RX-like_CC | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF9 |
| PFAM:PF00931 | SUPFAM:SSF52540 | TIGR:cd14798 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6D:-:469751149..469752009
Molecular Weight (calculated)
32340.3 Da
IEP (calculated)
7.036
GRAVY (calculated)
-0.323
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAALVSVAT GVLKPVLGKL AVLLGKECER FKGVRKEIQS LTHELAAMEA FLLKMSKEED PDEQDKVWMN EVREVSYDME DAIDDFMLSV DDKDAKPDGF
101: IDKIKCSLGM LGKMKARCRI GREIQDLKKQ FIEVGDRNAR YKTRQTFSNT KNVTIDPRAL SMFEHASKLV GIDEPKHEII KLLTEEASTH EQPKLGSIIG
201: TGGMGKTTLA NQVYEDLQEN FECRAFVSVS RNPDMMNILR IIHSQVSGLP FKDTKAGSIK QVIMNISNFI VNKRYIFYFS LPTYTS
101: IDKIKCSLGM LGKMKARCRI GREIQDLKKQ FIEVGDRNAR YKTRQTFSNT KNVTIDPRAL SMFEHASKLV GIDEPKHEII KLLTEEASTH EQPKLGSIIG
201: TGGMGKTTLA NQVYEDLQEN FECRAFVSVS RNPDMMNILR IIHSQVSGLP FKDTKAGSIK QVIMNISNFI VNKRYIFYFS LPTYTS
001: MVDAVTGFVL NKIGGYLINE VLALMGVKDD LEELKTELTC IHGYLKDVEA REREDEVSKE WTKLVLDIAY DIEDVLDTYF LKLEERSLRR GLLRLTNKIG
101: KKRDAYNIVE DIRTLKRRIL DITRKRETFG IGSFNEPRGE NITNVRVRQL RRAPPVDQEE LVVGLEDDVK ILLVKLLSDN EKDKSYIISI FGMGGLGKTA
201: LARKLYNSGD VKRRFDCRAW TYVSQEYKTR DILIRIIRSL GIVSAEEMEK IKMFEEDEEL EVYLYGLLEG KNYMVVVDDV WDPDAWESLK RALPCDHRGS
301: KVIITTRIRA IAEGVEGTVY AHKLRFLTFE ESWTLFERKA FSNIEKVDED LQRTGKEMVK KCGGLPLAIV VLSGLLSRKR TNEWHEVCAS LWRRLKDNSI
401: HISTVFDLSF KEMRHELKLC FLYFSVFPED YEIKVEKLIH LLVAEGFIQE DEEMMMEDVA RCYIDELVDR SLVKAERIER GKVMSCRIHD LLRDLAIKKA
501: KELNFVNVYN EKQHSSDICR REVVHHLMND YYLCDRRVNK RMRSFLFIGE RRGFGYVNTT NLKLKLLRVL NMEGLLFVSK NISNTLPDVI GELIHLRYLG
601: IADTYVSILP ASISNLRFLQ TLDASGNDPF QYTTDLSKLT SLRHVIGKFV GECLIGEGVN LQTLRSISSY SWSKLNHELL RNLQDLEIYD HSKWVDQRRV
701: PLNFVSFSKP KNLRVLKLEM RNFKLSSESR TTIGLVDVNF PSLESLTLVG TTLEENSMPA LQKLPRLEDL VLKDCNYSGV KIMSISAQGF GRLKNLEMSM
801: ERRGHGLDEL RIEEEAMPSL IKLTVKGRLE LTKLMIPDRL KAFVRRN
101: KKRDAYNIVE DIRTLKRRIL DITRKRETFG IGSFNEPRGE NITNVRVRQL RRAPPVDQEE LVVGLEDDVK ILLVKLLSDN EKDKSYIISI FGMGGLGKTA
201: LARKLYNSGD VKRRFDCRAW TYVSQEYKTR DILIRIIRSL GIVSAEEMEK IKMFEEDEEL EVYLYGLLEG KNYMVVVDDV WDPDAWESLK RALPCDHRGS
301: KVIITTRIRA IAEGVEGTVY AHKLRFLTFE ESWTLFERKA FSNIEKVDED LQRTGKEMVK KCGGLPLAIV VLSGLLSRKR TNEWHEVCAS LWRRLKDNSI
401: HISTVFDLSF KEMRHELKLC FLYFSVFPED YEIKVEKLIH LLVAEGFIQE DEEMMMEDVA RCYIDELVDR SLVKAERIER GKVMSCRIHD LLRDLAIKKA
501: KELNFVNVYN EKQHSSDICR REVVHHLMND YYLCDRRVNK RMRSFLFIGE RRGFGYVNTT NLKLKLLRVL NMEGLLFVSK NISNTLPDVI GELIHLRYLG
601: IADTYVSILP ASISNLRFLQ TLDASGNDPF QYTTDLSKLT SLRHVIGKFV GECLIGEGVN LQTLRSISSY SWSKLNHELL RNLQDLEIYD HSKWVDQRRV
701: PLNFVSFSKP KNLRVLKLEM RNFKLSSESR TTIGLVDVNF PSLESLTLVG TTLEENSMPA LQKLPRLEDL VLKDCNYSGV KIMSISAQGF GRLKNLEMSM
801: ERRGHGLDEL RIEEEAMPSL IKLTVKGRLE LTKLMIPDRL KAFVRRN
Arabidopsis Description
RPP13L3Putative disease resistance RPP13-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STE7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.