Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 1
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
- vacuole 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G464100.1 | Wheat | cytosol | 46.51 | 71.43 |
| TraesCSU01G205200.1 | Wheat | cytosol | 73.09 | 70.51 |
| TraesCS6D01G398600.1 | Wheat | cytosol, extracellular | 64.12 | 67.48 |
| TraesCS6D01G399300.1 | Wheat | cytosol, endoplasmic reticulum | 49.83 | 61.73 |
| TraesCS6D01G369700.1 | Wheat | cytosol | 34.55 | 46.64 |
| TraesCS6D01G373100.1 | Wheat | cytosol | 24.25 | 37.06 |
| TraesCS6D01G373200.1 | Wheat | cytosol | 32.89 | 35.61 |
| TraesCS1D01G030200.1 | Wheat | cytosol | 20.93 | 33.33 |
| TraesCS1D01G025200.1 | Wheat | cytosol | 23.92 | 31.58 |
| TraesCS6D01G399600.2 | Wheat | cytosol | 51.16 | 17.52 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G398900.1 | EnsemblPlantsGene:TraesCS6D01G398900 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | InterPro:RX-like_CC | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF9 |
| PFAM:PF00931 | SUPFAM:SSF52540 | TIGR:cd14798 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6D:-:469811728..469813092
Molecular Weight (calculated)
33691.8 Da
IEP (calculated)
6.540
GRAVY (calculated)
-0.299
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMEAALVTV ATGVLKPVLE KLATLLGNEY KRFKGVRKEI KSLSHELAAM EAFLFKMSDV EDPDVQDKVW MNEVRELSYD LEDAIDDFME SIGDKDEKPD
101: GFIEKIKSSL GKLGKMKARR WIGKEIQDLK KQIIEVGDRN ARYKSHETFS KTVNATIDPR ALAIFEHASK LVGIDEHKTE LIKLLTDDDG CATTQQQPKI
201: VSITGPGGMG KTTLANQVYQ EIKGQFECCA FLSVSRSPDM MNILRTILSE VSGQGYSSTK AGSVQILISK INDFLLNKRR EIDGESTKKN MSGFWLVILM
301: I
101: GFIEKIKSSL GKLGKMKARR WIGKEIQDLK KQIIEVGDRN ARYKSHETFS KTVNATIDPR ALAIFEHASK LVGIDEHKTE LIKLLTDDDG CATTQQQPKI
201: VSITGPGGMG KTTLANQVYQ EIKGQFECCA FLSVSRSPDM MNILRTILSE VSGQGYSSTK AGSVQILISK INDFLLNKRR EIDGESTKKN MSGFWLVILM
301: I
001: MVEAIVSFGV EKLWDRLTQE YEQFQGVEDR IAELKSNLNL LKSFLKDAEA KKNTSQMVRH CVEEIKEIVY DTENMIETFI LKEAARKRSG IIRRITKLTC
101: IKVHRWEFAS DIGGISKRIS KVIQDMHSFG VQQMISDGSQ SSHLLQERER EMRQTFSRGY ESDFVGLEVN VKKLVGYLVE EDDIQIVSVT GMGGLGKTTL
201: ARQVFNHEDV KHQFDRLAWV CVSQEFTRKN VWQMILQNLT SRETKDEILQ MEEAELHDEL FQLLETSKSL IVFDDIWKEE DWGLINPIFP PKKGWKVLIT
301: SRTETIAMHG NRRYVNFKPE CLTILESWIL FQRIAMPRVD ESEFKVDKEM EMMGKQMIKY CGGLPLAVKV LGGLLAAKYT FHDWKRLSEN IGCHIVGRTD
401: FSDGNNSSVY HVLSLSFEEL PSYLKHCFLY LAHFPEDHNI KVEKLSYCWA AEGILEPRHY HGQTIRDVGE SYIEELVRRN MVIAERDVTT LRFEACHLHD
501: MMREVCLLKA KEENFVQIAS ILPPTANSQY PGTSRRFVSQ NPTTLHVSRD INNPKLQSLL IVWENRRKSW KLLGSSFIRL ELLRVLDLYK AKFEGRNLPS
601: GIGKLIHLRY LNLDLARVSR LPSSLGNLRL LIYLDINVCT KSLFVPNCLM GMHELRYLRL PFNTSKEIKL GLCNLVNLET LENFSTENSS LEDLRGMVSL
701: RTLTIGLFKH ISKETLFASI LGMRHLENLS IRTPDGSSKF KRIMEDGIVL DAIHLKQLNL RLYMPKLPDE QHFPSHLTSI SLDGCCLVED PLPILEKLLE
801: LKEVRLDFRA FCGKRMVSSD GGFPQLHRLY IWGLAEWEEW IVEEGSMPRL HTLTIWNCQK LKQLPDGLRF IYSIKDLDMD KKWKEILSEG GEEYYKVQHI
901: PSVKFEKDYK
101: IKVHRWEFAS DIGGISKRIS KVIQDMHSFG VQQMISDGSQ SSHLLQERER EMRQTFSRGY ESDFVGLEVN VKKLVGYLVE EDDIQIVSVT GMGGLGKTTL
201: ARQVFNHEDV KHQFDRLAWV CVSQEFTRKN VWQMILQNLT SRETKDEILQ MEEAELHDEL FQLLETSKSL IVFDDIWKEE DWGLINPIFP PKKGWKVLIT
301: SRTETIAMHG NRRYVNFKPE CLTILESWIL FQRIAMPRVD ESEFKVDKEM EMMGKQMIKY CGGLPLAVKV LGGLLAAKYT FHDWKRLSEN IGCHIVGRTD
401: FSDGNNSSVY HVLSLSFEEL PSYLKHCFLY LAHFPEDHNI KVEKLSYCWA AEGILEPRHY HGQTIRDVGE SYIEELVRRN MVIAERDVTT LRFEACHLHD
501: MMREVCLLKA KEENFVQIAS ILPPTANSQY PGTSRRFVSQ NPTTLHVSRD INNPKLQSLL IVWENRRKSW KLLGSSFIRL ELLRVLDLYK AKFEGRNLPS
601: GIGKLIHLRY LNLDLARVSR LPSSLGNLRL LIYLDINVCT KSLFVPNCLM GMHELRYLRL PFNTSKEIKL GLCNLVNLET LENFSTENSS LEDLRGMVSL
701: RTLTIGLFKH ISKETLFASI LGMRHLENLS IRTPDGSSKF KRIMEDGIVL DAIHLKQLNL RLYMPKLPDE QHFPSHLTSI SLDGCCLVED PLPILEKLLE
801: LKEVRLDFRA FCGKRMVSSD GGFPQLHRLY IWGLAEWEEW IVEEGSMPRL HTLTIWNCQK LKQLPDGLRF IYSIKDLDMD KKWKEILSEG GEEYYKVQHI
901: PSVKFEKDYK
Arabidopsis Description
Putative disease resistance protein At1g58400 [Source:UniProtKB/Swiss-Prot;Acc:Q8W3K3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.