Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G205100.1 | Wheat | cytosol, nucleus, plastid | 100.0 | 100.0 |
| TraesCSU01G266800.1 | Wheat | cytosol | 60.2 | 62.77 |
| TraesCSU01G271900.1 | Wheat | extracellular | 69.39 | 31.63 |
| TraesCSU01G243600.1 | Wheat | extracellular | 69.39 | 31.63 |
| TraesCS2D01G056800.1 | Wheat | cytosol | 67.35 | 31.58 |
| TraesCS2B01G018800.1 | Wheat | extracellular | 62.24 | 29.33 |
| TraesCSU01G064500.1 | Wheat | cytosol | 62.24 | 28.24 |
| HORVU2Hr1G000570.1 | Barley | extracellular, plasma membrane | 69.39 | 25.56 |
| TraesCSU01G267900.1 | Wheat | extracellular | 36.73 | 17.22 |
| TraesCSU01G011300.1 | Wheat | cytosol | 60.2 | 16.48 |
| TraesCSU01G226100.1 | Wheat | extracellular, nucleus, plasma membrane | 59.18 | 14.68 |
| TraesCSU01G011100.1 | Wheat | extracellular | 68.37 | 12.88 |
| TraesCSU01G188500.1 | Wheat | cytosol | 36.73 | 8.41 |
| TraesCS2A01G006800.1 | Wheat | cytosol | 72.45 | 4.81 |
| TraesCSU01G012600.1 | Wheat | extracellular, plasma membrane | 71.43 | 4.78 |
| TraesCSU01G012800.1 | Wheat | endoplasmic reticulum, extracellular | 66.33 | 4.53 |
| OQU78685 | Sorghum | cytosol | 33.67 | 3.64 |
| TraesCSU01G083400.1 | Wheat | cytosol | 34.69 | 2.56 |
| TraesCS2B01G018400.1 | Wheat | mitochondrion | 1.02 | 0.14 |
| TraesCSU01G064400.1 | Wheat | endoplasmic reticulum | 0.0 | 0.0 |
| TraesCSU01G011200.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCSU01G247600.1 | Wheat | mitochondrion | 0.0 | 0.0 |
| TraesCS2B01G018700.1 | Wheat | cytosol, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCSU01G225100.1 | EnsemblPlantsGene:TraesCSU01G225100 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf | ncoils:Coil |
| PANTHER:PTHR44634 | PANTHER:PTHR44634:SF1 | SEG:seg | SUPFAM:SSF52058 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrUn:+:331986071..331986493
Molecular Weight (calculated)
11118.3 Da
IEP (calculated)
4.168
GRAVY (calculated)
-0.083
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MERFNKEQED ALQLLSSLQE LEFWSFNDLQ QLPAGLRNLT SLKKLSVYSC PAVLSLPNDA LPDSLKMLDI FSCSEELKQY CRGLVGTDSA LEFSCTFF
001: MASSSSSPRT WRYRVFTSFH GPDVRKTVLS HLRKQFICNG ITMFDDQRIE RGQTISPELT RGIRESRISI VVLSKNYASS SWCLDELLEI LKCKEDIGQI
101: VMTVFYGVDP SDVRKQTGEF GIRFSETWAR KTEEEKQKWS QALNDVGNIA GEHFLNWDKE SKMVETIARD VSNKLNTTIS KDFEDMVGIE AHLQKMQSLL
201: HLDNEDEAMI VGICGPSGIG KTTIARALHS RLSSSFQLTC FMENLKGSYN SGLDEYGLKL CLQQQLLSKI LNQNDLRIFH LGAIPERLCD QNVLIILDGV
301: DDLQQLEALT NETSWFGPGS RIIVTTEDQE LLEQHDINNT YHVDFPTIKE ARKIFCRSAF RQSSAPYGFE KLVERVLKLC SNLPLGLRVM GSSLRRKKED
401: DWESILHRQE NSLDRKIEGV LRVGYDNLHK NDQFLFLLIA FFFNYQDNDH VKAMLGDSKL DVRYGLKTLA YKSLIQISIK GDIVMHKLLQ QVGKEAVQRQ
501: DHGKRQILID SDEICDVLEN DSGNRNVMGI SFDISTLLND VYISAEAFKR IRNLRFLSIY KTRLDTNVRL HLSEDMVFPP QLRLLHWEVY PGKSLPHTFR
601: PEYLVELNLR DNQLEKLWEG IQPLTNLKKM ELLRSSNLKV LPNLSDATNL EVLNLALCES LVEIPPSIGN LHKLEKLIMD FCRKLKVVPT HFNLASLESL
701: GMMGCWQLKN IPDISTNITT LKITDTMLED LPQSIRLWSG LQVLDIYGSV NIYHAPAEIY LEGRGADIKK IPDCIKDLDG LKELHIYGCP KIVSLPELPS
801: SLKRLIVDTC ESLETLVHFP FESAIEDLYF SNCFKLGQEA RRVITKQSRD AWLPGRNVPA EFHYRAVGNS LTIPTDTYEC RICVVISPKQ KMVEFFDLLC
901: RQRKNGFSTG QKRLQLLPKV QAEHLFIGHF TLSDKLDSGV LLEFSTSSKD IDIIECGIQI FHGHYR
101: VMTVFYGVDP SDVRKQTGEF GIRFSETWAR KTEEEKQKWS QALNDVGNIA GEHFLNWDKE SKMVETIARD VSNKLNTTIS KDFEDMVGIE AHLQKMQSLL
201: HLDNEDEAMI VGICGPSGIG KTTIARALHS RLSSSFQLTC FMENLKGSYN SGLDEYGLKL CLQQQLLSKI LNQNDLRIFH LGAIPERLCD QNVLIILDGV
301: DDLQQLEALT NETSWFGPGS RIIVTTEDQE LLEQHDINNT YHVDFPTIKE ARKIFCRSAF RQSSAPYGFE KLVERVLKLC SNLPLGLRVM GSSLRRKKED
401: DWESILHRQE NSLDRKIEGV LRVGYDNLHK NDQFLFLLIA FFFNYQDNDH VKAMLGDSKL DVRYGLKTLA YKSLIQISIK GDIVMHKLLQ QVGKEAVQRQ
501: DHGKRQILID SDEICDVLEN DSGNRNVMGI SFDISTLLND VYISAEAFKR IRNLRFLSIY KTRLDTNVRL HLSEDMVFPP QLRLLHWEVY PGKSLPHTFR
601: PEYLVELNLR DNQLEKLWEG IQPLTNLKKM ELLRSSNLKV LPNLSDATNL EVLNLALCES LVEIPPSIGN LHKLEKLIMD FCRKLKVVPT HFNLASLESL
701: GMMGCWQLKN IPDISTNITT LKITDTMLED LPQSIRLWSG LQVLDIYGSV NIYHAPAEIY LEGRGADIKK IPDCIKDLDG LKELHIYGCP KIVSLPELPS
801: SLKRLIVDTC ESLETLVHFP FESAIEDLYF SNCFKLGQEA RRVITKQSRD AWLPGRNVPA EFHYRAVGNS LTIPTDTYEC RICVVISPKQ KMVEFFDLLC
901: RQRKNGFSTG QKRLQLLPKV QAEHLFIGHF TLSDKLDSGV LLEFSTSSKD IDIIECGIQI FHGHYR
Arabidopsis Description
Disease resistance protein (TIR-NBS-LRR class) family [Source:UniProtKB/TrEMBL;Acc:Q9CAD8]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.