Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G011300.1 | Wheat | cytosol | 90.38 | 99.72 |
| TraesCSU01G266800.1 | Wheat | cytosol | 23.29 | 97.87 |
| TraesCSU01G271900.1 | Wheat | extracellular | 36.96 | 67.91 |
| TraesCSU01G243600.1 | Wheat | extracellular | 36.96 | 67.91 |
| TraesCSU01G225100.1 | Wheat | cytosol, nucleus, plastid | 14.68 | 59.18 |
| TraesCSU01G205100.1 | Wheat | cytosol, nucleus, plastid | 14.68 | 59.18 |
| TraesCSU01G011100.1 | Wheat | extracellular | 75.7 | 57.5 |
| TraesCSU01G064500.1 | Wheat | cytosol | 29.87 | 54.63 |
| TraesCSU01G267900.1 | Wheat | extracellular | 15.95 | 30.14 |
| TraesCS2B01G018200.1 | Wheat | cytosol | 100.0 | 27.78 |
| TraesCS2D01G004900.1 | Wheat | cytosol | 71.39 | 21.59 |
| TraesCSU01G012600.1 | Wheat | extracellular, plasma membrane | 78.73 | 21.23 |
| TraesCSU01G188500.1 | Wheat | cytosol | 21.27 | 19.63 |
| HORVU2Hr1G000510.18 | Barley | nucleus, plastid | 70.89 | 17.51 |
| TraesCSU01G012800.1 | Wheat | endoplasmic reticulum, extracellular | 61.01 | 16.81 |
| TraesCSU01G083400.1 | Wheat | cytosol | 24.05 | 7.14 |
| OQU78685 | Sorghum | cytosol | 12.15 | 5.3 |
| TraesCSU01G064400.1 | Wheat | endoplasmic reticulum | 0.0 | 0.0 |
| TraesCSU01G011200.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCSU01G247600.1 | Wheat | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCSU01G226100.1 | EnsemblPlantsGene:TraesCSU01G226100 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf | ncoils:Coil |
| PANTHER:PTHR44634 | PANTHER:PTHR44634:SF1 | SEG:seg | SUPFAM:SSF52058 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrUn:+:334804365..334805552
Molecular Weight (calculated)
43770.0 Da
IEP (calculated)
4.977
GRAVY (calculated)
-0.093
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTSLRTLIV KESVGLVGPL GGGQSDVEWQ LPVEYIKIYK LNGNTGKELT ELLPHLPKLS KLVIWWCKSI KKLVVGVDVQ QTTQEASEMG GGEITAAAEE
101: EDDGVLLLPA HLCDSLRELW FNYCPELVLV DPPTLVPGGG WLQALRSLQR LTIRWSPKFL STFSFSRYLF PSSLQFLELV GVQGMGTLEP LSNLSSLIRL
201: ELGNCGEDLK CQVLWSLITT GGQLKELEVR GSHRFFADRD PNPRRALEDA EGGEEQQTQI VSSTLHELGT DDIAGFLAAP VCRFLSSSLT KLKLRGNWCE
301: GMERFSKEQE DALQLLSSLQ ELDFSCFKDL HQLPAGMSNL TSLKKLTIYE CPALSSLPKD GLPKSLQELN VGLCSNQQIR RECRGLEGTI PKIVL
101: EDDGVLLLPA HLCDSLRELW FNYCPELVLV DPPTLVPGGG WLQALRSLQR LTIRWSPKFL STFSFSRYLF PSSLQFLELV GVQGMGTLEP LSNLSSLIRL
201: ELGNCGEDLK CQVLWSLITT GGQLKELEVR GSHRFFADRD PNPRRALEDA EGGEEQQTQI VSSTLHELGT DDIAGFLAAP VCRFLSSSLT KLKLRGNWCE
301: GMERFSKEQE DALQLLSSLQ ELDFSCFKDL HQLPAGMSNL TSLKKLTIYE CPALSSLPKD GLPKSLQELN VGLCSNQQIR RECRGLEGTI PKIVL
0001: MKCRKMLDQT VMTIFYEVDP TDVKKQTGDF GKVFKKTCMG KTNAVSRKWI EALSEVATIA GEHSINWDTE AAMIEKISTD ISNKLNNSTP LRDFDGLVGM
0101: GAHMEKLELL LCLDSCEVRM IGIWGPPGIG KTTIVRFLYN QLSSSFELSI FMENIKTMHT ILASSDDYSA KLILQRQFLS KILDHKDIEI PHLRVLQERL
0201: YNKKVLVVLD DVDQSVQLDA LAKETRWFGP RSRILITTQD RKLLKAHRIN NIYKVDLPNS DDALQIFCMY AFGQKTPYDG FYKLARKVTW LVGNFPLGLR
0301: VVGSYFREMS KQEWRKEIPR LRARLDGKIE SVLKFSYDAL CDEDKDLFLH IACFFNHESI EKLEDFLGKT FLDIAQRFHV LAEKSLISIN SNFVEMHDSL
0401: AQLGKEIVRK QSVREPGQRQ FLVDARDISE VLADDTAGGR SVIGIYLDLH RNDDVFNISE KAFEGMSNLQ FLRVKNFGNL FPAIVCLPHC LTYISRKLRL
0501: LDWMYFPMTC FPSKFNPEFL VELNMWGSKL EKLWEEIQPL RNLKRMDLFS SKNLKELPDL SSATNLEVLN LNGCSSLVEL PFSIGNATKL LKLELSGCSS
0601: LLELPSSIGN AINLQTIDFS HCENLVELPS SIGNATNLKE LDLSCCSSLK ELPSSIGNCT NLKKLHLICC SSLKELPSSI GNCTNLKELH LTCCSSLIKL
0701: PSSIGNAINL EKLILAGCES LVELPSFIGK ATNLKILNLG YLSCLVELPS FIGNLHKLSE LRLRGCKKLQ VLPTNINLEF LNELDLTDCI LLKTFPVIST
0801: NIKRLHLRGT QIEEVPSSLR SWPRLEDLQM LYSENLSEFS HVLERITVLE LSDINIREMT PWLNRITRLR RLKLSGCGKL VSLPQLSDSL IILDAENCGS
0901: LERLGCSFNN PNIKCLDFTN CLKLDKEARD LIIQATARHY SILPSREVHE YITNRAIGSS LTVKLNQRAL PTSMRFKACI VLADNGGREA GNEGRMEVYM
1001: TIMERQNDFI TSTYVSLNHI FPEFLREHMY TVEVLVDVEV TSDELVFDFQ LNSEKWEIGE CGVLELKNHV QTFSEIDSWD NY
0101: GAHMEKLELL LCLDSCEVRM IGIWGPPGIG KTTIVRFLYN QLSSSFELSI FMENIKTMHT ILASSDDYSA KLILQRQFLS KILDHKDIEI PHLRVLQERL
0201: YNKKVLVVLD DVDQSVQLDA LAKETRWFGP RSRILITTQD RKLLKAHRIN NIYKVDLPNS DDALQIFCMY AFGQKTPYDG FYKLARKVTW LVGNFPLGLR
0301: VVGSYFREMS KQEWRKEIPR LRARLDGKIE SVLKFSYDAL CDEDKDLFLH IACFFNHESI EKLEDFLGKT FLDIAQRFHV LAEKSLISIN SNFVEMHDSL
0401: AQLGKEIVRK QSVREPGQRQ FLVDARDISE VLADDTAGGR SVIGIYLDLH RNDDVFNISE KAFEGMSNLQ FLRVKNFGNL FPAIVCLPHC LTYISRKLRL
0501: LDWMYFPMTC FPSKFNPEFL VELNMWGSKL EKLWEEIQPL RNLKRMDLFS SKNLKELPDL SSATNLEVLN LNGCSSLVEL PFSIGNATKL LKLELSGCSS
0601: LLELPSSIGN AINLQTIDFS HCENLVELPS SIGNATNLKE LDLSCCSSLK ELPSSIGNCT NLKKLHLICC SSLKELPSSI GNCTNLKELH LTCCSSLIKL
0701: PSSIGNAINL EKLILAGCES LVELPSFIGK ATNLKILNLG YLSCLVELPS FIGNLHKLSE LRLRGCKKLQ VLPTNINLEF LNELDLTDCI LLKTFPVIST
0801: NIKRLHLRGT QIEEVPSSLR SWPRLEDLQM LYSENLSEFS HVLERITVLE LSDINIREMT PWLNRITRLR RLKLSGCGKL VSLPQLSDSL IILDAENCGS
0901: LERLGCSFNN PNIKCLDFTN CLKLDKEARD LIIQATARHY SILPSREVHE YITNRAIGSS LTVKLNQRAL PTSMRFKACI VLADNGGREA GNEGRMEVYM
1001: TIMERQNDFI TSTYVSLNHI FPEFLREHMY TVEVLVDVEV TSDELVFDFQ LNSEKWEIGE CGVLELKNHV QTFSEIDSWD NY
Arabidopsis Description
Disease resistance protein (TIR-NBS-LRR class) family [Source:UniProtKB/TrEMBL;Acc:F4IFF6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.