Factsheet for VIT_05s0020g03000.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g03010.t01	Wine grape	cytosol	57.45	58.18
VIT_18s0001g10800.t01	Wine grape	cytosol	51.24	50.61
VIT_03s0063g00750.t01	Wine grape	cytosol	48.45	48.3
VIT_03s0063g00830.t01	Wine grape	cytosol	44.41	47.35
VIT_03s0063g00790.t01	Wine grape	cytosol	43.79	46.84
VIT_03s0063g00740.t01	Wine grape	cytosol	46.27	46.27
VIT_03s0063g00820.t01	Wine grape	cytosol	42.86	45.85
VIT_03s0063g00720.t01	Wine grape	cytosol	45.65	45.51
VIT_03s0063g00730.t01	Wine grape	cytosol	44.72	45.0
VIT_03s0063g00700.t01	Wine grape	cytosol	45.03	44.89
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	40.99	44.0
VIT_03s0063g00800.t01	Wine grape	cytosol	40.68	43.67
VIT_03s0063g00810.t01	Wine grape	cytosol	41.61	42.81
VIT_18s0001g10810.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, plastid	44.72	39.45
VIT_03s0063g00770.t01	Wine grape	plastid	40.37	31.25

Protein Annotations

EntrezGene:100264785	wikigene:100264785	Gene3D:3.40.50.1820	MapMan:9.2.2.8.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3
ProteinID:CCB50401	ProteinID:CCB50401.1	UniProt:F6HDN0	EMBL:FN595749	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	GO:GO:0052689	InterPro:IPR029058	EntrezGene:LOC100264785
wikigene:LOC100264785	InterPro:Lipase_GDXG_HIS_AS	PFAM:PF07859	ScanProsite:PS01173	PANTHER:PTHR23024	PANTHER:PTHR23024:SF193
SUPFAM:SSF53474	TIGR:TC68759	UniParc:UPI00019831DC	ArrayExpress:VIT_05s0020g03000	EnsemblPlantsGene:VIT_05s0020g03000	EnsemblPlants:VIT_05s0020g03000.t01
unigene:Vvi.9630	RefSeq:XP_002277866	RefSeq:XP_002277866.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr5:-:4744289..4745805

Molecular Weight (calculated)

35692.0 Da

IEP (calculated)

5.375

GRAVY (calculated)

-0.315

Length

322 amino acids

Sequence
(BLAST)

001: MDSREPEIAC EFLPFLRVYK DGSIDRLVDP PSVPPSLDDP DTGVSSKDII ISPDTGVSAR IYLPKLTNTH QKLPILVYFH GGGFCVGSAF SAADHRYINT
101: LSSQATLLAI SIEYRLAPTH PLPTAYEDCW AALQWVSSHS TGGDEPWLTQ HGNFDRIFIG GDSAGGNIAH NTVMRAGTES LPNGVRILGA FLSQPYFWGS
201: QPIGSESVED HHQKVSYRIW KFVCPSSEAG IDDSRVNPCS RTPGCPSLSK LGCRRLLVCV AGKDELRDRD VRYYEAVRES GWEGEVELYE EKEEGHVFHI
301: FNPESENAKN MVSRLVAFLQ MK

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.