Factsheet for VIT_18s0001g10810.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plastid

Predictor Summary:

plastid 3
mitochondrion 2
endoplasmic reticulum 2
nucleus 1
extracellular 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, mitochondrion, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g079190.2.1	Tomato	cytosol, extracellular	54.25	62.86
PGSC0003DMT400020612	Potato	cytosol	53.97	62.15
Bra014080.1-P	Field mustard	cytosol	50.41	58.6
CDY17014	Canola	cytosol	50.14	58.28
KRH61262	Soybean	cytosol	49.86	57.78
KRH51960	Soybean	cytosol	51.51	57.67
CDY69438	Canola	cytosol	49.59	57.64
AT1G47480.1	Thale cress	cytosol	49.04	57.01
VIT_18s0001g10800.t01	Wine grape	cytosol	47.4	53.07
VIT_03s0063g00750.t01	Wine grape	cytosol	46.58	52.63
GSMUA_Achr5P11010_001	Banana	cytosol	42.47	51.84
VIT_03s0063g00740.t01	Wine grape	cytosol	45.48	51.55
VIT_03s0063g00730.t01	Wine grape	cytosol	44.38	50.62
VIT_03s0063g00820.t01	Wine grape	cytosol	41.64	50.5
VIT_03s0063g00830.t01	Wine grape	cytosol	41.64	50.33
VIT_03s0063g00720.t01	Wine grape	cytosol	44.38	50.15
VIT_03s0063g00700.t01	Wine grape	cytosol	43.84	49.54
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	40.27	49.0
VIT_05s0020g03010.t01	Wine grape	cytosol	41.64	47.8
VIT_03s0063g00800.t01	Wine grape	cytosol	39.18	47.67
VIT_03s0063g00790.t01	Wine grape	cytosol	38.08	46.18
VIT_03s0063g00810.t01	Wine grape	cytosol	39.45	46.01
VIT_05s0020g03000.t01	Wine grape	cytosol	39.45	44.72
VIT_03s0063g00770.t01	Wine grape	plastid	41.1	36.06

Protein Annotations

EntrezGene:100264240	wikigene:100264240	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3
ProteinID:CCB45859	ProteinID:CCB45859.1	UniProt:F6H009	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	InterPro:IPR029058	EntrezGene:LOC100264240	wikigene:LOC100264240	PFAM:PF07859	PANTHER:PTHR23024
PANTHER:PTHR23024:SF258	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI0002108107	ArrayExpress:VIT_18s0001g10810	EnsemblPlantsGene:VIT_18s0001g10810
EnsemblPlants:VIT_18s0001g10810.t01	unigene:Vvi.17803	RefSeq:XP_002284585	RefSeq:XP_002284585.1	RefSeq:XP_002284585.2	SEG:seg

Description

No Description!

Coordinates

chr18:+:9083105..9084413

Molecular Weight (calculated)

40323.1 Da

IEP (calculated)

6.645

GRAVY (calculated)

-0.062

Length

365 amino acids

Sequence
(BLAST)

001: MNSPLFTSCR NYSPIGYKLT VNLRNTIGLL FYAVVPVAFF KSSQFLMDSS KPKVIHEVVP YLRVYEDGTI ERLLGTEVTP AAFDPQTGVV STDVVVVPET
101: GVSARLYRPK LTPNNQKLPL VVYFHGGAFC ISSAADPKYH HCLNTLVATA NVIAVSVNYR RAPEHPLPAA YDDSWAVLQW VASHSVGGEG SEAWVRDDVD
201: FERVFLVGDS AGANIAHHLA LRIVGSRSAQ RMKLVGIGLI HPYFWGEDQI GSEAKDPVRK AMVDKWWQLV CPSGRGNDDP LINPFVDGAP SFKDLGCDKV
301: LVCVAERDIL RDRGRLYYET LVKSGWGGTA EMVETEGEDH VFHIFQADSD KARSLVRSVA SFINH

Best Arabidopsis Sequence Match ( AT1G47480.1 )
(BLAST)

001: MESTKKQVSL ELLPWLVVHT DGTVERLAGT EVCPPGLDPI TGVFSKDIII EPKTGLSARI YRPFSIQPGQ KIPLMLYFHG GAFLISSTSF PSYHTSLNKI
101: VNQANVIAVS VNYRLAPEHP LPTAYEDSWT ALKNIQAINE PWINDYADLD SLFLVGDSAG ANISHHLAFR AKQSDQTLKI KGIGMIHPYF WGTQPIGAEI
201: KDEARKQMVD GWWEFVCPSE KGSDDPWINP FADGSPDLGG LGCERVMITV AEKDILNERG KMYYERLVKS EWKGKVEIME TKEKDHVFHI FEPDCDEAME
301: MVRCLALFIN QVEA

Arabidopsis Description

CXE2Probable carboxylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.