Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0040g00290.t01 | Wine grape | extracellular | 3.48 | 3.06 |
Protein Annotations
| ArrayExpress:VIT_08s0040g00280 | EMBL:FN596008 | EnsemblPlants:VIT_08s0040g00280.t01 | EnsemblPlantsGene:VIT_08s0040g00280 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005643 | GO:GO:0006810 | GO:GO:0006913 |
| GO:GO:0008150 | PANTHER:PTHR14494 | ProteinID:CBI32869 | ProteinID:CBI32869.3 | UniParc:UPI0001BE3A1B | UniProt:D7TQ62 |
| MapMan:23.5.1.1.1.8 | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:+:11217946..11220260
Molecular Weight (calculated)
22701.1 Da
IEP (calculated)
7.338
GRAVY (calculated)
-0.331
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSFPQPGSV TVCEINRNLI TALNLSDDGA KDAYGKQLGM VFSPVPFQWD QLLALSPEHG AEQPPQVTGE SVAPRRKDLS TALQRIVNDS LKRFFHPNDV
101: NCLPEVDLQG VSWHRHKHIL AFISGPNQVI VRDYEDSEGK EPCILTHESQ RDVKLIEWRP NGGKTLSVAC KQGWYLYVGC FLSWQCCNCK IWGCPFLRNC
201: C
101: NCLPEVDLQG VSWHRHKHIL AFISGPNQVI VRDYEDSEGK EPCILTHESQ RDVKLIEWRP NGGKTLSVAC KQGWYLYVGC FLSWQCCNCK IWGCPFLRNC
201: C
001: MASFPHPGSV TVCEINRDLI TAQNLSDERA QETYGKVLGM VFSPVSFDST PSSLQENEGQ ENGDKASGES KGLVATLQMK VADSLKQILQ PTDVTLLSEI
101: DLQGVSWHQG KHIIAFISGA NQVTIRDYED KDEKEPCILT SDSQRNVKAL EWRPNGGKSL SIACRGGICI WAASYPGNMA LVRSGGSALR GSLSRGSGTR
201: WILVDFLRCQ NDEQISALSW SPCGRYLASA SYDSSSFTIW DVSQGAGTPI RRGLGGISML KWSPTGDYFF AARFDGTFCL WETNTWTSEP WSLSSGSGSV
301: TGAIWDPEGR FILISFSKSS TLGSVHFSSK PPSLDAHLLP VELPEIASLT GCEGIEKIAW DASGERLAVS YKGGDENYKG LIAIYDTRRT PIVSASLVGF
401: IRGPGENPKA LSFSFHDKFK QGPLLSVCWS TGFCCTYPLI FRSHVLP
101: DLQGVSWHQG KHIIAFISGA NQVTIRDYED KDEKEPCILT SDSQRNVKAL EWRPNGGKSL SIACRGGICI WAASYPGNMA LVRSGGSALR GSLSRGSGTR
201: WILVDFLRCQ NDEQISALSW SPCGRYLASA SYDSSSFTIW DVSQGAGTPI RRGLGGISML KWSPTGDYFF AARFDGTFCL WETNTWTSEP WSLSSGSGSV
301: TGAIWDPEGR FILISFSKSS TLGSVHFSSK PPSLDAHLLP VELPEIASLT GCEGIEKIAW DASGERLAVS YKGGDENYKG LIAIYDTRRT PIVSASLVGF
401: IRGPGENPKA LSFSFHDKFK QGPLLSVCWS TGFCCTYPLI FRSHVLP
Arabidopsis Description
AAASAladin [Source:UniProtKB/Swiss-Prot;Acc:Q8GWR1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.