Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0139g00320.t01 | Wine grape | cytosol | 34.19 | 43.07 |
| VIT_13s0139g00340.t01 | Wine grape | cytosol | 35.32 | 42.99 |
| VIT_13s0158g00170.t01 | Wine grape | cytosol | 32.3 | 37.63 |
| VIT_19s0027g01170.t01 | Wine grape | cytosol | 23.12 | 35.25 |
| VIT_19s0027g00660.t01 | Wine grape | cytosol | 21.91 | 35.23 |
| Solyc01g106410.1.1 | Tomato | plasma membrane | 30.65 | 34.97 |
| TraesCS7D01G018400.1 | Wheat | cytosol | 8.36 | 34.58 |
| PGSC0003DMT400008029 | Potato | cytosol | 30.65 | 34.55 |
| HORVU7Hr1G002290.1 | Barley | cytosol | 16.72 | 34.0 |
| TraesCS5B01G309200.1 | Wheat | cytosol | 11.14 | 33.64 |
| TraesCS7B01G024800.1 | Wheat | cytosol, plastid | 10.17 | 33.58 |
| TraesCS5B01G034600.1 | Wheat | cytosol | 11.45 | 33.55 |
| TraesCS5B01G034500.1 | Wheat | cytosol | 11.6 | 33.55 |
| TraesCS7D01G122800.1 | Wheat | cytosol | 18.0 | 33.24 |
| VIT_13s0084g00060.t01 | Wine grape | cytosol | 25.3 | 33.2 |
| Os08t0542200-01 | Rice | cytosol | 12.12 | 33.13 |
| TraesCS7D01G017600.1 | Wheat | cytosol | 19.2 | 33.03 |
| TraesCS7D01G018200.1 | Wheat | cytosol | 21.23 | 33.02 |
| HORVU7Hr1G000950.1 | Barley | cytosol | 13.48 | 32.97 |
| TraesCS7D01G018700.1 | Wheat | cytosol | 17.55 | 32.82 |
| VIT_19s0027g01350.t01 | Wine grape | cytosol | 28.92 | 32.74 |
| TraesCS7D01G017900.1 | Wheat | cytosol | 9.04 | 32.17 |
| TraesCS7D01G001400.1 | Wheat | cytosol, endoplasmic reticulum, golgi | 10.47 | 32.1 |
| TraesCS7D01G018500.1 | Wheat | cytosol | 13.4 | 31.79 |
| TraesCS7B01G056900.1 | Wheat | extracellular, plasma membrane | 17.7 | 31.67 |
| TraesCS3B01G503600.1 | Wheat | extracellular, nucleus, plastid, vacuole | 21.16 | 30.91 |
| TraesCS7D01G123100.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 10.32 | 30.58 |
| TraesCS7D01G017400.1 | Wheat | cytosol, extracellular | 13.86 | 30.41 |
| HORVU7Hr1G000890.2 | Barley | cytosol | 20.48 | 30.32 |
| HORVU7Hr1G002260.2 | Barley | cytosol | 23.64 | 30.22 |
| TraesCS3B01G497800.1 | Wheat | cytosol | 21.84 | 29.99 |
| TraesCS7D01G123300.1 | Wheat | cytosol, mitochondrion, nucleus | 16.72 | 29.96 |
| TraesCS7D01G018000.1 | Wheat | cytosol | 25.98 | 29.92 |
| TraesCS7D01G017700.1 | Wheat | cytosol | 25.9 | 29.89 |
| TraesCS7B01G024600.1 | Wheat | cytosol | 13.7 | 29.5 |
| TraesCS7D01G122900.1 | Wheat | cytosol | 23.42 | 29.31 |
| TraesCS5D01G315800.1 | Wheat | extracellular, golgi, nucleus, plastid | 26.13 | 29.23 |
| TraesCS7D01G122700.1 | Wheat | cytosol | 22.89 | 29.2 |
| Os08t0543100-00 | Rice | cytosol | 25.98 | 29.14 |
| Os05t0380300-01 | Rice | plasma membrane | 27.56 | 29.07 |
| TraesCS7B01G024700.1 | Wheat | cytosol | 23.49 | 28.97 |
| OQU80806 | Sorghum | cytosol | 25.15 | 28.89 |
| TraesCS7D01G017300.1 | Wheat | plasma membrane | 15.96 | 28.84 |
| TraesCS7B01G024900.1 | Wheat | cytosol | 23.64 | 28.83 |
| EES14143 | Sorghum | cytosol | 25.38 | 28.83 |
| HORVU7Hr1G026360.1 | Barley | extracellular | 23.42 | 28.74 |
| EES14172 | Sorghum | cytosol | 25.6 | 28.55 |
| Os08t0543500-01 | Rice | cytosol, plastid | 24.7 | 28.45 |
| OQU80781 | Sorghum | cytosol, extracellular, nucleus | 25.45 | 28.43 |
| HORVU7Hr1G000760.3 | Barley | cytosol | 20.41 | 28.23 |
| TraesCS7B01G096400.1 | Wheat | cytosol, extracellular, nucleus | 20.56 | 28.06 |
| TraesCS7D01G000900.1 | Wheat | plasma membrane | 23.19 | 27.87 |
| Os08t0543050-00 | Rice | cytosol, plastid | 25.38 | 27.85 |
| TraesCS5D01G398100.1 | Wheat | cytosol | 25.23 | 27.78 |
| Zm00001d031711_P001 | Maize | cytosol | 24.77 | 27.53 |
| TraesCS7D01G123000.1 | Wheat | cytosol, plastid | 23.87 | 27.42 |
| TraesCS7B01G339900.1 | Wheat | plasma membrane | 25.45 | 27.37 |
| TraesCS5D01G031100.1 | Wheat | mitochondrion | 15.74 | 26.93 |
| HORVU5Hr1G006710.5 | Barley | cytosol | 24.92 | 26.12 |
Protein Annotations
| Gene3D:1.10.8.430 | EntrezGene:100253303 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ProteinID:CCB44587 |
| ProteinID:CCB44587.1 | ncoils:Coil | UniProt:F6GXA1 | EMBL:FN594963 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0043531 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp |
| InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PFAM:PF13855 | PRINTS:PR00364 | PANTHER:PTHR23155 |
| PANTHER:PTHR23155:SF672 | InterPro:RX-like_CC | SMART:SM00369 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI0002108379 |
| ArrayExpress:VIT_13s0019g01880 | EnsemblPlantsGene:VIT_13s0019g01880 | EnsemblPlants:VIT_13s0019g01880.t01 | RefSeq:XP_019073364.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr13_random:+:3221419..3227361
Molecular Weight (calculated)
150718.0 Da
IEP (calculated)
6.627
GRAVY (calculated)
-0.189
Length
1328 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFVAEAAVSS IFDLVLEKLV AAAAAPLSEY ARRQNVEATL QEWRRILLHI EAVLTDAEQK QIRERAVKLW LDDLKSLVYD MEDVLDEFNT EANLQIVIPG
0101: PQASTSKVHK LIPTCFAACH PTSVKFNAKI GEKIEKITRE LDAVAKRKHD FDLMKGVGGL SFEMEERLQT TSLVDESSIY GRDAKKEAII QFLLSEKASR
0201: DNGDNGVSVV PIVGMGGVGK TTLAQIIYHD KRVESHFDTR IWVCVSDRFD VTGITKAILE SVTHSSTDSK NLDSLQNSLK NGLNGKKFFL VLDDVWNEKP
0301: QNWDALKAPF RAGAQGSMII VTTRNEDVAS IMRTTASSHH LDVLSYEECR LLFAKHAFAH MNTNIRQKLE PIGEEIVKKC RGLPLAAKSL GSLLHTKEDE
0401: NAWNEVLNNG IWDFQIERSD ILPALYLSYH YLPTNLKRCF AYCSIFPKDY KFEKRNLVLL WMAEGLLGGS KREETIEDYG NMCFDNLLSR SFFQQASDDE
0501: SIFLMHDLIH DLAQFVSGKF CSSLDDEKKS QISKQTRHSS YVRAEQFELS KKFDPFYEAH NLRTFLPVHT GHQYGRIFLS KKVSDLLLPT LKCLRVLSLA
0601: HYHIVELPHS IGTLKHLRYL DLSRTSIRRL PESITNLFNL QTLMLSNCDS LTHLPTEMGK LINLQTLMLS NCISLTHLPT EMGKLINLQT LMLSNCISLT
0701: HLPTEMGKLI NLQHLDITNT ILKEMPMGMK GLKRLRTLTA FVVGEDRGAK IKELRDMSHL GGRLCISKLQ NVVDAMDVFE ANLKGKERLD ELVMQWDGEA
0801: TARDLQKETT VLEKLQPHNN LKELTIEYYC GEKFPNWLSE HSFTNMVSMQ LHDCKNCSSL PSLGQLGSLK ELSIMRIDGV QKVGQEFYGN IGSSSFKPFE
0901: ALEILRFEEM LEWEEWVCRE IEFPCLKELY IKKCPKLKKD LPKHLPKLTK LEIRECKQLV CCLPMAPSIR KLELEKCDDV VVRSAGSLTS LASLDISNVC
1001: KIPDELGQLH SLVELYVLFC PELKEIPPIL HNLTSLKDLK VENCESLASF PEMALPPMLE SLQIFSCPIL ESLPEGMIAS FTKLETLHLW NCTNLESLYI
1101: RDGLHHMDLT SLQSLDIWNC PNLVSFPRGG LPTPNLRWLG IYNCEKLKSL PQGMHTLLTS LELLTIEGCP EIDSFPEGGL PTNLSSLYIV NCNKLLACRM
1201: EWGLQTLPFL RTLQIGGYEK ERFPEERFLP STLTSLEIRG FPNLKSLDNK GLQHLTSLET LEIWKCGNLK SFPKQGLPSS LSRLYIGECP LLRKRCQRDK
1301: GKEWPKISHI PCIAFDQSDM ENGEVILS
0101: PQASTSKVHK LIPTCFAACH PTSVKFNAKI GEKIEKITRE LDAVAKRKHD FDLMKGVGGL SFEMEERLQT TSLVDESSIY GRDAKKEAII QFLLSEKASR
0201: DNGDNGVSVV PIVGMGGVGK TTLAQIIYHD KRVESHFDTR IWVCVSDRFD VTGITKAILE SVTHSSTDSK NLDSLQNSLK NGLNGKKFFL VLDDVWNEKP
0301: QNWDALKAPF RAGAQGSMII VTTRNEDVAS IMRTTASSHH LDVLSYEECR LLFAKHAFAH MNTNIRQKLE PIGEEIVKKC RGLPLAAKSL GSLLHTKEDE
0401: NAWNEVLNNG IWDFQIERSD ILPALYLSYH YLPTNLKRCF AYCSIFPKDY KFEKRNLVLL WMAEGLLGGS KREETIEDYG NMCFDNLLSR SFFQQASDDE
0501: SIFLMHDLIH DLAQFVSGKF CSSLDDEKKS QISKQTRHSS YVRAEQFELS KKFDPFYEAH NLRTFLPVHT GHQYGRIFLS KKVSDLLLPT LKCLRVLSLA
0601: HYHIVELPHS IGTLKHLRYL DLSRTSIRRL PESITNLFNL QTLMLSNCDS LTHLPTEMGK LINLQTLMLS NCISLTHLPT EMGKLINLQT LMLSNCISLT
0701: HLPTEMGKLI NLQHLDITNT ILKEMPMGMK GLKRLRTLTA FVVGEDRGAK IKELRDMSHL GGRLCISKLQ NVVDAMDVFE ANLKGKERLD ELVMQWDGEA
0801: TARDLQKETT VLEKLQPHNN LKELTIEYYC GEKFPNWLSE HSFTNMVSMQ LHDCKNCSSL PSLGQLGSLK ELSIMRIDGV QKVGQEFYGN IGSSSFKPFE
0901: ALEILRFEEM LEWEEWVCRE IEFPCLKELY IKKCPKLKKD LPKHLPKLTK LEIRECKQLV CCLPMAPSIR KLELEKCDDV VVRSAGSLTS LASLDISNVC
1001: KIPDELGQLH SLVELYVLFC PELKEIPPIL HNLTSLKDLK VENCESLASF PEMALPPMLE SLQIFSCPIL ESLPEGMIAS FTKLETLHLW NCTNLESLYI
1101: RDGLHHMDLT SLQSLDIWNC PNLVSFPRGG LPTPNLRWLG IYNCEKLKSL PQGMHTLLTS LELLTIEGCP EIDSFPEGGL PTNLSSLYIV NCNKLLACRM
1201: EWGLQTLPFL RTLQIGGYEK ERFPEERFLP STLTSLEIRG FPNLKSLDNK GLQHLTSLET LEIWKCGNLK SFPKQGLPSS LSRLYIGECP LLRKRCQRDK
1301: GKEWPKISHI PCIAFDQSDM ENGEVILS
0001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNL LSSFLKDADA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
Arabidopsis Description
RF9Probable disease resistance protein RDL6 [Source:UniProtKB/Swiss-Prot;Acc:P0DI18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.