Factsheet for VIT_13s0139g00340.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0139g00320.t01	Wine grape	cytosol	92.67	95.92
VIT_13s0158g00170.t01	Wine grape	cytosol	40.51	38.77
TraesCS7D01G018400.1	Wheat	cytosol	10.91	37.07
Solyc01g106410.1.1	Tomato	plasma membrane	39.32	36.86
VIT_19s0027g01170.t01	Wine grape	cytosol	29.33	36.74
TraesCS5B01G309200.1	Wheat	cytosol	14.76	36.59
TraesCS7B01G024800.1	Wheat	cytosol, plastid	13.47	36.57
TraesCS7D01G001400.1	Wheat	cytosol, endoplasmic reticulum, golgi	14.3	36.03
Os08t0542200-01	Rice	cytosol	16.04	36.01
PGSC0003DMT400008029	Potato	cytosol	38.77	35.91
HORVU7Hr1G002290.1	Barley	cytosol	21.45	35.83
TraesCS5B01G034500.1	Wheat	cytosol	14.94	35.51
VIT_13s0019g01880.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.99	35.32
TraesCS7D01G122800.1	Wheat	cytosol	23.19	35.19
TraesCS7D01G017600.1	Wheat	cytosol	24.84	35.1
VIT_19s0027g00660.t01	Wine grape	cytosol	26.49	34.99
TraesCS5B01G034600.1	Wheat	cytosol	14.48	34.88
TraesCS7D01G018500.1	Wheat	cytosol	17.78	34.64
VIT_13s0084g00060.t01	Wine grape	cytosol	31.99	34.49
TraesCS7D01G018200.1	Wheat	cytosol	26.86	34.31
HORVU7Hr1G000950.1	Barley	cytosol	17.05	34.25
TraesCS7D01G018700.1	Wheat	cytosol	22.09	33.94
TraesCS7D01G123100.1	Wheat	endoplasmic reticulum, golgi, vacuole	13.84	33.71
TraesCS7D01G017900.1	Wheat	cytosol	11.37	33.24
VIT_19s0027g01350.t01	Wine grape	cytosol	35.38	32.91
TraesCS7B01G056900.1	Wheat	extracellular, plasma membrane	21.91	32.21
Os08t0543100-00	Rice	cytosol	34.92	32.18
HORVU7Hr1G000890.2	Barley	cytosol	26.31	32.0
TraesCS7D01G123300.1	Wheat	cytosol, mitochondrion, nucleus	21.72	31.98
TraesCS7B01G024600.1	Wheat	cytosol	18.06	31.93
TraesCS3B01G503600.1	Wheat	extracellular, nucleus, plastid, vacuole	26.58	31.9
TraesCS7D01G017400.1	Wheat	cytosol, extracellular	17.69	31.9
TraesCS7D01G122700.1	Wheat	cytosol	30.34	31.8
HORVU7Hr1G026360.1	Barley	extracellular	31.44	31.7
TraesCS3B01G497800.1	Wheat	cytosol	27.77	31.33
TraesCS7B01G024700.1	Wheat	cytosol	30.52	30.92
TraesCS7B01G024900.1	Wheat	cytosol	30.8	30.85
TraesCS5D01G315800.1	Wheat	extracellular, golgi, nucleus, plastid	33.46	30.75
TraesCS7D01G122900.1	Wheat	cytosol	29.79	30.63
HORVU7Hr1G002260.2	Barley	cytosol	28.96	30.41
TraesCS7D01G017700.1	Wheat	cytosol	32.08	30.41
OQU80806	Sorghum	cytosol	32.17	30.36
Os08t0543050-00	Rice	cytosol, plastid	33.55	30.25
TraesCS7D01G017300.1	Wheat	plasma membrane	20.35	30.2
TraesCS7D01G018000.1	Wheat	cytosol	31.71	30.01
Os08t0543500-01	Rice	cytosol, plastid	31.53	29.84
EES14172	Sorghum	cytosol	32.54	29.81
HORVU7Hr1G000760.3	Barley	cytosol	26.21	29.79
OQU80781	Sorghum	cytosol, extracellular, nucleus	32.45	29.77
Os05t0380300-01	Rice	plasma membrane	34.19	29.63
TraesCS7D01G000900.1	Wheat	plasma membrane	29.79	29.41
TraesCS7B01G096400.1	Wheat	cytosol, extracellular, nucleus	25.94	29.09
TraesCS7D01G123000.1	Wheat	cytosol, plastid	30.8	29.07
TraesCS5D01G398100.1	Wheat	cytosol	32.08	29.02
EES14143	Sorghum	cytosol	30.89	28.83
Zm00001d031711_P001	Maize	cytosol	31.53	28.79
TraesCS5D01G031100.1	Wheat	mitochondrion	20.44	28.74
TraesCS7B01G339900.1	Wheat	plasma membrane	32.08	28.34
HORVU5Hr1G006710.5	Barley	cytosol	32.63	28.1

Protein Annotations

EntrezGene:100253197	wikigene:100253197	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:CCB58676
ProteinID:CCB58676.1	ncoils:Coil	UniProt:F6HVG3	EMBL:FN596255	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531
InterPro:IPR032675	EntrezGene:LOC100253197	wikigene:LOC100253197	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF884	InterPro:RX-like_CC	SUPFAM:SSF52047
SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI00015CC3CF	ArrayExpress:VIT_13s0139g00340	EnsemblPlantsGene:VIT_13s0139g00340	EnsemblPlants:VIT_13s0139g00340.t01
RefSeq:XP_002269779	RefSeq:XP_002269779.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr13:+:20572744..20576287

Molecular Weight (calculated)

124065.0 Da

IEP (calculated)

6.459

GRAVY (calculated)

-0.203

Length

1091 amino acids

Sequence
(BLAST)

0001: MAVGEIFLSA AFQITLEKLA SPMSKELEKR FGDLKKLTRT LSKIQAVLSD AEARQITNAA VKLWLGDVEE VAYDAEDVLE EVMTEASRLK LQNPVSYLSS
0101: LSRDFQLEIR SKLEKINERL DEIEKERDGL GLREISGEKR NNKRPQSSSL VEESRVLGRE VEKEEIVELL VSDEYGGSDV CVIPIVGMGG LGKTTLAQLV
0201: YNDEKVTKHF ELKMWVCVSD DFDVRRATKS VLDSATGKNF DLMDLDILQS KLRDILKGKR YLLVLDDVWT EKKSDWDRLR LPLRAGATGS KIIVTTRSGR
0301: VSSVMGTMPP RHLEGLSDDD CWSLFKQIAF ENRNADAHPE LVRIGEEILK KCRGLPLAVK TIGGLLYLET DEYEWEMILK SDLWDFEEDE NGILPALRLS
0401: YNHLPEHLKQ CFVFCSVFPK DYNFEKETLV LLWIAEGFVL AKGRKHLEDL GSDYFDELLL RSFFQRSKFN SSKFFVMHDL VHDLAQYLAG DLCFRLEEGK
0501: SQSISERARH AAVLHNTFKS GVTFEALGTT TNLRTVILLH GNERSETPKA IVLHDLLPTL RCLRVLDLSH IAVEEIPDMV GRLKHLRYLN LSSTRIKMLP
0601: PSVCTLYNLQ SLILMNCNNL KGLPNDMKKL LNLRHLNLTG CWHLICMPPQ IGELTCLRTL HRFVVAKEKG CGIGELKGMT ELRATLIIDR LEDVSMVSEG
0701: REANLKNKQY LRRLELKWSP GHHMPHAIGE ELLECLEPHG NLKELKIDVY HGAKFPNWMG YSLLSRLERI ELSQCTYSRI LPPLGQLPLL KYLSIDTMSE
0801: LESISCEFCG EGQIRGFPSL EKMKLEDMKN LKEWHEIEEG DFPRLHELTI KNSPNFASLP KFPSLCDLVL DECNEMILGS VQFLSSLSSL KISNFRRLAL
0901: LPEGLLQHLN SLKELRIQNF YRLEALKKEV GLQDLVSLQR FEILSCPKLV SLPEEGLSSA LRYLSLCVCN SLQSLPKGLE NLSSLEELSI SKCPKLVTFP
1001: EEKLPSSLKL LRISACANLV SLPKRLNELS VLQHLAIDSC HALRSLPEEG LPASVRSLSI QRSQLLEKRC EEGGEDWNKI AHIPDRYITR F

Best Arabidopsis Sequence Match ( AT3G50950.1 )
(BLAST)

001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT

Arabidopsis Description

RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.