Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0077g00570.t01 | Wine grape | cytosol | 16.44 | 26.9 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:35.1 | ProteinID:CCB43153 | ProteinID:CCB43153.1 | InterPro:F-box-assoc_dom_typ1 | InterPro:F-box-assoc_interact_dom |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | UniProt:F6GTE4 | EMBL:FN594950 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031146 |
| InterPro:IPR001810 | PFAM:PF00646 | PFAM:PF07734 | PANTHER:PTHR45433 | SMART:SM00256 | SUPFAM:SSF81383 |
| TIGRFAMs:TIGR01640 | UniParc:UPI000210A5E3 | ArrayExpress:VIT_17s0000g05010 | EnsemblPlantsGene:VIT_17s0000g05010 | EnsemblPlants:VIT_17s0000g05010.t01 | unigene:Vvi.12263 |
Description
No Description!
Coordinates
chr17:-:5482720..5494676
Molecular Weight (calculated)
58919.5 Da
IEP (calculated)
9.523
GRAVY (calculated)
-0.241
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MILVIWSIYR NPELWTLQVR NVRRFKEETE SAGKDLLENV FPSAGFRNEL KYIEVKRDPK IIVDDMNENG NNAILPEHCT GFLFCRRVPF AKVLLGVIEG
101: GTLNPPFQML RPKRHRTTKT DGHARSSKKG SQVRSSKKDG RASTTKKDGP VNDLLPELIS EILSRLPIEL ILRCRSVCKT WNSVIQSPLF INLQARKSHN
201: QPSRVILKPI FGGVTATTMH SLFLLDTEER KSRRIHDKSW RFSGLQIMSS CNGLLCITSD SELGPVYISN PITREFVILP SPETGFSLLR HQVGLGFDSS
301: NGKYIVVRAY TDKSKSQVNK FEAIMLGENS WRSLTVPDII AECTINGSVF WNGALHWKIK KKPGRECMLS FDVSSGKFAV TRFPVSADVP DDFEMVELDG
401: HLSLVQVYDT QMKIWRVTGE KIEGLSVCYE DMYCMNVRWN SSFNCEIIRG YIDEGYLLQV NTHRGPGGAW RRYLTQYFPK MEQFLSLIIP SIPICFKTIS
501: FRPTLISPMQ LHFVPHG
101: GTLNPPFQML RPKRHRTTKT DGHARSSKKG SQVRSSKKDG RASTTKKDGP VNDLLPELIS EILSRLPIEL ILRCRSVCKT WNSVIQSPLF INLQARKSHN
201: QPSRVILKPI FGGVTATTMH SLFLLDTEER KSRRIHDKSW RFSGLQIMSS CNGLLCITSD SELGPVYISN PITREFVILP SPETGFSLLR HQVGLGFDSS
301: NGKYIVVRAY TDKSKSQVNK FEAIMLGENS WRSLTVPDII AECTINGSVF WNGALHWKIK KKPGRECMLS FDVSSGKFAV TRFPVSADVP DDFEMVELDG
401: HLSLVQVYDT QMKIWRVTGE KIEGLSVCYE DMYCMNVRWN SSFNCEIIRG YIDEGYLLQV NTHRGPGGAW RRYLTQYFPK MEQFLSLIIP SIPICFKTIS
501: FRPTLISPMQ LHFVPHG
001: MDNQKGALFP DEVILQILAR LPVKSLFRFK SVCKSWYRLP SDKYFTSLFN QLSVKEQLLV AEVSDSSSLI CVDNLRGVSE LSLDFVRDRV RIRVSSNGLL
101: CCSSIPEKGV YYVCNPSTRE YRKLPKSRER PVTRFYPDGE ATLVGLACDL SKNKFNVVLA GYHRSFGQRP DGSFICLVFD SESNKWRKFV SVLEECSFTH
201: MSKNQVVFVN GMLHWLMSGL CYILALDVEH DVWRKISLPD EIRIGNGGGN RVYLLESDGF LSVIQLSDVW MKIWKMSEYE TETWSVVDSI SLRCIKGLVP
301: GIFPICQTGE YVFLATHKQV LVYQRRSKLW KEMFSVKGSS SLPLWFSAHA FRSTIVPCN
101: CCSSIPEKGV YYVCNPSTRE YRKLPKSRER PVTRFYPDGE ATLVGLACDL SKNKFNVVLA GYHRSFGQRP DGSFICLVFD SESNKWRKFV SVLEECSFTH
201: MSKNQVVFVN GMLHWLMSGL CYILALDVEH DVWRKISLPD EIRIGNGGGN RVYLLESDGF LSVIQLSDVW MKIWKMSEYE TETWSVVDSI SLRCIKGLVP
301: GIFPICQTGE YVFLATHKQV LVYQRRSKLW KEMFSVKGSS SLPLWFSAHA FRSTIVPCN
Arabidopsis Description
F-box protein At5g49610 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGY4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.