Factsheet for Zm00001d014650_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014649_P001	Maize	extracellular	86.98	88.45
KXG20754	Sorghum	extracellular	87.19	88.29
Zm00001d014654_P001	Maize	cytosol, endoplasmic reticulum	69.27	70.52
Zm00001d014652_P001	Maize	cytosol	65.73	70.5
TraesCS7D01G416200.1	Wheat	extracellular	57.92	62.82
TraesCS7B01G324300.1	Wheat	extracellular	60.73	62.02
TraesCS7A01G423400.1	Wheat	extracellular	60.62	61.91
TraesCS7B01G323800.1	Wheat	extracellular	60.52	61.81
HORVU7Hr1G097880.1	Barley	cytosol, extracellular	60.31	61.6
Os06t0698812-00	Rice	cytosol, extracellular	18.54	60.54
Zm00001d023923_P001	Maize	endoplasmic reticulum	42.81	45.51
Zm00001d035172_P001	Maize	endoplasmic reticulum	32.6	35.25
Zm00001d035174_P001	Maize	endoplasmic reticulum	16.25	34.74
Zm00001d035183_P004	Maize	endoplasmic reticulum	32.5	34.48
Zm00001d052987_P001	Maize	cytosol	29.69	32.99
Zm00001d052988_P006	Maize	cytosol	31.04	32.75
AT3G07040.1	Thale cress	cytosol	29.06	30.13
PGSC0003DMT400047578	Potato	plasma membrane	28.12	28.6
Zm00001d030016_P001	Maize	golgi, plasma membrane	28.75	28.48
Solyc08g005440.2.1	Tomato	cytosol, extracellular	27.5	28.36
Zm00001d052581_P001	Maize	cytosol, plasma membrane	26.67	28.1
Zm00001d052997_P001	Maize	cytosol	29.17	27.24

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.8.430	EntrezGene:103626399	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1
UniProt:A0A1D6GUU5	ProteinID:AQK66721.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0043531
InterPro:IPR032675	InterPro:IPR036388	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF19	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540
SignalP:SignalP-noTM	UniParc:UPI0002219242	InterPro:WH-like_DNA-bd_sf	EnsemblPlantsGene:Zm00001d014650	EnsemblPlants:Zm00001d014650_P001	EnsemblPlants:Zm00001d014650_T001
SEG:seg	:	:	:	:	:

Description

Disease resistance protein RPM1

Coordinates

chr5:-:57311562..57315887

Molecular Weight (calculated)

109259.0 Da

IEP (calculated)

7.753

GRAVY (calculated)

-0.041

Length

960 amino acids

Sequence
(BLAST)

001: MADALLVVLR KVALSLAEGA LEKIGKEVVE AAPLMTDFEH SMKQIEGELS VLQAFINQVS AQRVSDKAFD AWLDQVRDVA HEVEDIIDEY AYLTAQAVDT
101: SSFFKRKFHQ FKGIAAWKKF PGQISQVEAR IQRLSEMRNR YGFSVSQLDR TNNFQLSIQF SLSNSAYLID NSEIVGNADE IGKLTQWLLE EKQDRSLIAI
201: LGMGGLGKTA IASTVYKNQK IITSFDCHAW VIVSQTYQVE ELLREIINQL IIKERASMAS GFMTMSRMRL VEVIQSYLRD KKYFVVLDDV WDKDAWLFLN
301: YAFVRNERGS KVLITTRRKD VSSLAADNYV IELKTLKDAE SWELFCKKAF HASEDNICPE NIRCWATKIV AKCQGLPLAI VTIGSILSYR DLKEHEWAFF
401: FKQLSWQLAN NPELSWISSV LKLSLNDLPS YLRSCFLYCS IFPEDYKIRR KLISKLWIAE GLVEERGDGT TMEEVAECYL MELTQRSLLQ VTERKACGRA
501: RTFLMHDLVR EITSTIAKKE KFSVALAHGG ASTSQVAHEA RRLCIQRGAQ TLNSLSSSRL RSFILFDTEV PCSWIHDTVS CFRLLRVLCL RFVNVEQVPG
601: VITELYNLRY LDMSYTKVKM IPASFGKLVN LQVLDLRDTY VEELPLEITM LTKLRQLQVY ALYDILQRSP NSFSATKFFG NICHLKNLQA LQVVSANKDL
701: VSQLGNLNLM RSLAIAEVRQ SYIAELWNSL TKMPNLKRLI ISTCNVNETL DMEMLKPLPN LTTFVLSGKL ERGLLPSIFS VKLKQLKLDW SSLKKDPVSS
801: LSHMLNLVDL FLTGGYAGEQ LTFRNRWFPN LKCLQLADME HLNWIEVEDG TMMNLQCLSL AGLRNLKAVP DGIKYIRALH EMFLTDMSNE FIVRLHGSDN
901: HIVQHIPNIK KFESSDSQAV NNVYIPWLAE KFGSGAVAHL ALDGSMGVVC ASGNHFKSEE

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.