Factsheet for Zm00001d035174_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G022900.1	Wheat	endoplasmic reticulum, vacuole	59.47	55.97
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	44.77	51.67
Zm00001d035172_P001	Maize	endoplasmic reticulum	93.76	47.41
Zm00001d035183_P004	Maize	endoplasmic reticulum	88.2	43.76
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	53.45	38.9
TraesCS2A01G046700.1	Wheat	extracellular, plastid	61.69	38.26
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	60.58	38.04
OQU89669	Sorghum	endoplasmic reticulum, golgi, plasma membrane	65.7	37.92
TraesCS6A01G056200.1	Wheat	endoplasmic reticulum	62.14	32.44
Os09t0479500-01	Rice	endoplasmic reticulum, golgi	66.59	31.15
TraesCSU01G024000.1	Wheat	cytosol	62.14	30.46
HORVU2Hr1G007170.1	Barley	plasma membrane	61.69	30.44
TraesCS2A01G046900.1	Wheat	endoplasmic reticulum	61.92	30.32
TraesCS2B01G058900.1	Wheat	cytosol	61.47	30.2
TraesCSU01G177000.1	Wheat	cytosol	59.91	29.46
Zm00001d052988_P006	Maize	cytosol	37.19	18.35
Zm00001d023923_P001	Maize	endoplasmic reticulum	36.53	18.16
Zm00001d052987_P001	Maize	cytosol	32.74	17.01
Zm00001d014652_P001	Maize	cytosol	33.85	16.98
Solyc08g005440.2.1	Tomato	cytosol, extracellular	34.52	16.65
Zm00001d014649_P001	Maize	extracellular	34.97	16.63
PGSC0003DMT400047578	Potato	plasma membrane	34.74	16.53
Zm00001d014650_P001	Maize	extracellular	34.74	16.25
AT3G07040.1	Thale cress	cytosol	32.74	15.87
Zm00001d014654_P001	Maize	cytosol, endoplasmic reticulum	33.18	15.8
Zm00001d030016_P001	Maize	golgi, plasma membrane	34.08	15.79
Zm00001d052997_P001	Maize	cytosol	35.86	15.66
Zm00001d052581_P001	Maize	cytosol, plasma membrane	30.96	15.26

Protein Annotations

EnsemblPlants:Zm00001d035174_P001	EnsemblPlants:Zm00001d035174_T001	EnsemblPlantsGene:Zm00001d035174	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	ncoils:Coil
PANTHER:PTHR43886	PANTHER:PTHR43886:SF6	PFAM:PF00931	PRINTS:PR00364	ProteinID:AQK78474.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52540	UniParc:UPI0002209243	UniProt:A0A1D6LEV1	MapMan:35.1	:

Description

Disease resistance protein RPM1

Coordinates

chr6:-:7777229..7778628

Molecular Weight (calculated)

51761.1 Da

IEP (calculated)

7.129

GRAVY (calculated)

-0.204

Length

449 amino acids

Sequence
(BLAST)

001: MAEIAVLLVL KKIAIALAGE TLSFAKDLLA KKSELVAALP DDMKLISNEL ELIRAFLKKI GRTGRKDEVI ETWIGQVRRL AYNMEDTVDH FIYVVSTHNQ
101: TGSPLDYLKK IAKKPQRLLS LDEIASEIKK IKQELIQLSE SSYETEKEMY LPGHDYSIRD EELAGIDKNK QTLISSLKFE DPSLRIIAVR GMGGIGKSTL
201: ANNVYKNEGF NFDCRAWVSI SQSYKLEDIW KKMLTDILKK DKKEFDPGTI DSAELKEKLI KTLDKKRYLI ILDDVWMADV FFRIKEVLLD NGLGSRVIIT
301: TRTEEVASLA EDSCKIKVEP LGDHDSWLVF CRKAFPKVEN HICPSELRQC GESIVEKCDG LQLALVAIRS ILSLRPKNVA EWKLFYDQLI WELHNNENLN
401: RVEKIINLSY KYLPDYLKNC FLYCAMFPED YLIHRKRLIR LWIAEGFIE

Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)

001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL

Arabidopsis Description

Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.