CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035174_P001	Maize	endoplasmic reticulum	37.92	65.7
TraesCSU01G022900.1	Wheat	endoplasmic reticulum, vacuole	36.25	59.12
Os09t0479500-01	Rice	endoplasmic reticulum, golgi	70.95	57.5
TraesCS2D01G044900.1	Wheat	endoplasmic reticulum, extracellular	50.51	54.97
TraesCS2D01G044800.1	Wheat	endoplasmic reticulum, extracellular, plastid	27.25	54.5
Zm00001d035183_P004	Maize	endoplasmic reticulum	59.51	51.16
TraesCS2A01G046700.1	Wheat	extracellular, plastid	47.3	50.83
Zm00001d035172_P001	Maize	endoplasmic reticulum	57.45	50.34
TraesCS5D01G083300.1	Wheat	endoplasmic reticulum, extracellular	39.33	49.59
TraesCS2A01G046900.1	Wheat	endoplasmic reticulum	56.81	48.2
TraesCS2B01G058900.1	Wheat	cytosol	56.56	48.14
HORVU2Hr1G007170.1	Barley	plasma membrane	56.17	48.02
TraesCSU01G024000.1	Wheat	cytosol	56.43	47.93
TraesCSU01G177000.1	Wheat	cytosol	55.14	46.99
TraesCS6A01G056200.1	Wheat	endoplasmic reticulum	49.74	45.0
KXG22876	Sorghum	cytosol	25.19	35.57
EES09588	Sorghum	cytosol	33.55	28.81
OQU84545	Sorghum	cytosol, endoplasmic reticulum	33.42	28.42
EER95978	Sorghum	cytosol	32.39	28.22
OQU83246	Sorghum	endoplasmic reticulum	29.95	28.11
EES08313	Sorghum	cytosol	31.88	27.96
EES08326	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.65	27.91
KXG20754	Sorghum	extracellular	33.8	27.74
EES08155	Sorghum	cytosol	31.88	27.19
KXG20755	Sorghum	cytosol	33.03	27.14
EES08151	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.13	27.0
KXG20759	Sorghum	extracellular	33.03	27.0
KXG28194	Sorghum	endoplasmic reticulum	32.9	26.98
Solyc08g005440.2.1	Tomato	cytosol, extracellular	32.26	26.96
KXG20758	Sorghum	cytosol	32.65	26.94
PGSC0003DMT400047578	Potato	plasma membrane	32.52	26.8
EES09609	Sorghum	cytosol	31.23	26.79
EER94459	Sorghum	extracellular, vacuole	31.23	26.47
OQU83076	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.49	26.26
OQU79236	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.49	26.26
KXG20757	Sorghum	cytosol	31.88	26.16
OQU83240	Sorghum	cytosol, extracellular	33.29	25.77
KXG27976	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	31.75	25.73
AT3G07040.1	Thale cress	cytosol	30.46	25.59
KXG26778	Sorghum	cytosol, plastid	30.21	25.08
KXG33491	Sorghum	cytosol	25.84	24.13

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1W0W5I2	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
EnsemblPlants:OQU89669	ProteinID:OQU89669	ProteinID:OQU89669.1	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR43886	PANTHER:PTHR43886:SF6	InterPro:RX-like_CC	EnsemblPlantsGene:SORBI_3002G240500	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI0009DC81F8	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:63038929..63042396

Molecular Weight (calculated)

89478.0 Da

IEP (calculated)

8.177

GRAVY (calculated)

-0.145

Length

778 amino acids

Sequence
(BLAST)

001: MVDVVVLLVI KKIGIAAACE TLKLAKPLLG KNSELQMALP DNMKLIKDEL EIISAFLKEV GMKDYNSEVI QTWIRQVRRL AYDMEDIVDQ FMYRISEYQQ
101: RDTWNCVKKL FKRHPSLFSL NEIAIRADII NKEVVELSKR ISRWAQPITG MNFIPAVNCD SEQQLYHPGH DHSINDNELV GIDKNREILI NSLHLEDPPL
201: RIIAVWGMGG LGKSTLVNNV YKNEAVISKF NCHAWVSISQ SYKINDIWRN MLKEIHGNDN RAFDAGSIDS AQLRVRLTKI LEKKRYLIIL DDVWTAEVLF
301: KIREILVDNG LGSRVIITTR IEEVASIAEA GCKIKVEPLN DHDSWLLFCK KAFPKNKNYI CPPELHQCGK DIVEKCDGLP LALVAIGSLL SLKIRNHKEW
401: RFFYNQLISE LHNNENLNHV EKILNLSYKY LPDNLKNCFL YCAIFPEDYL IHRKMLIRLW ISEGFIEHKG GCSLEDVGEV YLTELIQRSM FQVVARNSFD
501: RIQCICMHDL VRELAIYQSK KENFCAIYDD IGVVQVGLHP RRVSVLQHNN GIQSSMDPSR LRTFIAFDTR MSSCSWHSFI PSESKYLTVL DLSGLPIEDI
601: PSSIGELFNL RYLCLNDTNV KELPKSINLQ TLSLERTRAL NFPHGFSKLN KLAYTGQQLN FHGKMFQKLK KVVLWDLPQV NQICIHEGAL VSLEYLHIDS
701: LKKLRDVPLG IKFLNSIKEA YFTRMHSEFA RNLQMGKLDQ IPKVYLSTEG VSSVQSETTR LPGPPQWRIL SGSGWVFI

Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)

001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL

Arabidopsis Description

Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.